Detailed information of aacu_s0060.g29.t1 in Acropora acuminata

Genomic Location: sc0000060_pilon:647181...661009
NR annotation: XP_029211208.2, histone deacetylase 8-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6GPA7Histone deacetylase 8 OS=Xenopus laevis OX=8355 GN=hdac8 PE=2 SV=1
Q7SXM0Histone deacetylase 8 OS=Danio rerio OX=7955 GN=hdac8 PE=2 SV=1
B1H369Histone deacetylase 8 OS=Xenopus tropicalis OX=8364 GN=hdac8 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00850Hist_deacetylHistone deacetylase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037138Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan
IPR023801DomainHistone deacetylase domainInterproscan
IPR050284FamilyHistone deacetylase and polyamine deacetylaseInterproscan
IPR023696Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR003084FamilyHistone deacetylaseInterproscan
IPR000286FamilyHistone deacetylase familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10625HISTONE DEACETYLASE HDAC1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0004407Molecular Functionhistone deacetylase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11405HDAC8; histone deacetylase 8EC:3.5.1.98
Chromosome and associated proteinsko03036deepkoala

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