Detailed information of aacu_s0072.g25.t1 in Acropora acuminata

Genomic Location: sc0000072_pilon:358962...375395
NR annotation: XP_015754748.1, PREDICTED: DNA mismatch repair protein Msh3-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P20585DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4
P13705DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3
Q2UT70DNA mismatch repair protein msh3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=msh3 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01624MutS_IMutS domain IDomainInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan
PF05188MutS_IIMutS domain IIDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR007695DomainDNA mismatch repair protein MutS-like, N-terminalInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR019080DomainYqaJ viral recombinaseInterproscan
IPR016151Homologous_superfamilyDNA mismatch repair protein MutS, N-terminalInterproscan
IPR007860DomainDNA mismatch repair protein MutS, connector domainInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006312Biological Processmitotic recombinationInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

TOP