Gene detail

Detailed information of aacu_s0073.g23.t1 in Acropora acuminata

Genomic Location: sc0000073_pilon:271576...287705
NR annotation: XP_044184578.1, G-protein coupled receptor GRL101-like isoform X1 [Acropora millepora]
Species abbreviation AACUM · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

aacu_s0073.g23.t1

ATGCCAAGCGTGAATTTGTTTGTGAGCGTTGTACTGTTGTCTGTTTGGATACAGACGAAGTCAGAAAAACAAACCTGTCCCTTTGTAACGGAGAACAAAAAGTGCTGTAGGCTGCCATTTGAATACAACAATCGTCGATACGAAGAATGCATAGCTGATGTGAAAGAGAAGGCCTGGAACTTTCATTGGGGGAACCCTTGGTGCTTTGCGCAGACGGATGACAGGAATCAAAAATACCGTTGCCTTAGAAACGAAAACAGCTGTGGGGGAGCACGCTCTCAAACAGCAGGGGTTATTTCTTCGTCTAACTTTCCACAAAACTACAAAACCAACGTTTCGTGCTCCTGGAAAATACAGGTCGATTCAGCCAATTACATCACGCTAAATTTCACTGACTTTGAATTAGAAAATAGTAGCAATTGTGCACATGCGCGTGTGAGTGTCTACGATGGACTCAATTCATCTGATCCCTCCTTGGGGGTATTCTGTGGCAATGAGCTACCCAGGGGCATTCGTTCAAGTAGCAACAAGATGTTGGTAGAATTCATTGCAGGGCGCGGTGATTTGTTCAAAGGATTTCGTGCTTATTATGATTCTGGGGACTGCCGTGTTCGTTCGTACGGTGGTAATGGCGGTGGAGCATGTTGTGTTTTCCCTTTCACATACAAAGGAAAGCTCTTCAACGACTGTGCAATACAAGACGATGCTCACCCCAGCAATCTCTGGTGTTCTGTTACTCCTAATTTTGACAGGGACGAAAAGAGAGGATTCTGCATCGCTGAAGATGTTCCCTGTGGTGTTGGGAAGTTTGAATGCAAGAATTATCATTGGTGGAAACAATGTATTGACATGAAGTATCGCTGTGACGGAAATCCGAATTGTGCAGACAACTCCGACGAGAAGGATTGCCCACTCATGGTGAACCCTGATGCATGCGTTGTCTTTTACACATTGAAATTTCCAAATAATAAGAGTAATGTGGCTTTTAAAATGGACAGAAACTGTAACTATGAAAACCGCTGTAATGCGACAAAAAATCAAGGTCCTGGTAAACCTTGTAATTTCAGCGATTCATTCAAGTGTAGAAACAATCTTTGTGTTCCGAATTACTGGCGATGTGACGGCAAAGACGATTGTGGAGACAGGAGCGATGAACATGATTGTCCTTACGAATTCGATACCAGCAAAGAGGCTTGTAGCTGGACAGGCCACTGTGTCAAAGATGGTTGGGAGGCTCATCTTGGAAACGAAACACCTGTCATTAAATCGCTTGCTATTTGTAGCAGGAAAAACATCACAGCAATACCAACTTACCTTCCTACCAAGTTAACGGTCTTGTTGATACCTGGGGGGAAGATAGCACGAATTGAAAAGTTCAATTTCGCAAGATACAGCTCTCTTCGTAAAATTGACTTAGAAAGAAACCAAATAACGAGTATAAAACCACATTCCTTTATCAATCAACGCCAACTGAAGACCTTGATATTAAAAAGCAACAAGATTCGTGTACTAGAAACTGGTACCTTCAAAGGACTCGTCAAACTAACTGAACTAATTCTCTCGGATAATCCCATTGAAAAGATAGAGAAGGGTGCTTTTTATGGTCTTGAAAAACTGCGTTCTCTGAATTTAAGCAACATGAAGCTCTCTTCAATATCCTCTGGGGCTTTCAACGGAATGGATTCTTTACGTGAGCTATACTTAGGTAACAATGAAAACTTACAGCAGCTACCACTGGATATATTTAGCAGCATTTCACTTCGCTTCCTACAAGCCGACAGATTTGAATTTTGTTGCATAGCCAGACTTTCTGGACCACAATGCGCCGCTCCAAAGGACCTCTTCTCTTCTTGTAACAACCTGATGGCTAACATGACATTGAGGCTATCCATATGGATTCTGGGAAGTATAGCGCTGTTCGGCAATGCCTTTGTACTTCTATGGCGGTTGAAAACAAAGAGTGACAACAGAGTGCATGCGCTGTTGCTGTTGAACCTCGCAATTGCTGACTTTTTTATGGGAATCTACCTAGCTCTGATTGGTTCTGTGGATGCTTTTTATCGCGGCAGGTACTTTATATACAACGACAGATGGAAGCACAGCCCCTTGTGCCAGTTCAGCGGATTTGTGTCCACATTATCGAGCGAAGCGTCCGTGATGATATTAACCATTATGACATTGGATAGATATGTCACCATTGTACACCCATTCAAGCATTTTGGATTGAGCATTCGCGGAGCACACGTGACATTGGTCATCACGTGGATAGCCGCGTTTGTTCTCGCGGGAGTTCCACTCACTGGTATACCTTACCTCAAAGAATTTTACGCCCGCTCTGGTGTTTGTCTTCCTCTTCATTTAACAGCGGATAAGCCAGCGGGATGGGAGTATTCGGTGTTTTTATTTTTAGCCTTAAACTTTGCATCTTTTATGATTATTTTCTTTCTCTATTTAATCATGTTTCTAAAGATTCAAAAAACTCGAAAACTGAGTGGAGCGGGACCGGCCGTTTCATCCATTGGCTCGAGAATGGTCTTCATTGTTTTAACAGATTTTTGTTGCTGGATTCCTATAATCATCATCGGCATAGCTTCACTTGTTGGTATGGAAGCTCCTCCATCAGTGTACGCTTGGGTAGCAGTGTTCGTTCTTCCTCTGAACTCAGCGTTAAATCCGATCCTCTACACGATCTCCACCGCAAATTTTCGTCGGAAATTTCGTCGCACCTTACGAAAGGAAATTCCGATGACGATCGCTTCCGAAAATACTTATATTGAGTCAAGAACTATGGATTCCGGACATGTGCGGTCGGTCTTTCTATCTGCTTCCAACGAAGAATCCAATTTGCTGAACGGCAGAGTCAACGAATCGGGCGTGTGA

Transcript

aacu_s0073.g23.t1

AGTCAAGGCAGCTGTTTTATATTCTTTCACATTCAGGTCAAGGAAGAAGATTACGTGGAATATGCCAAGCGTGAATTTGTTTGTGAGCGTTGTACTGTTGTCTGTTTGGATACAGACGAAGTCAGAAAAACAAACCTGTCCCTTTGTAACGGAGAACAAAAAGTGCTGTAGGCTGCCATTTGAATACAACAATCGTCGATACGAAGAATGCATAGCTGATGTGAAAGAGAAGGCCTGGAACTTTCATTGGGGGAACCCTTGGTGCTTTGCGCAGACGGATGACAGGAATCAAAAATACCGTTGCCTTAGAAACGAAAACAGCTGTGGGGGAGCACGCTCTCAAACAGCAGGGGTTATTTCTTCGTCTAACTTTCCACAAAACTACAAAACCAACGTTTCGTGCTCCTGGAAAATACAGGTCGATTCAGCCAATTACATCACGCTAAATTTCACTGACTTTGAATTAGAAAATAGTAGCAATTGTGCACATGCGCGTGTGAGTGTCTACGATGGACTCAATTCATCTGATCCCTCCTTGGGGGTATTCTGTGGCAATGAGCTACCCAGGGGCATTCGTTCAAGTAGCAACAAGATGTTGGTAGAATTCATTGCAGGGCGCGGTGATTTGTTCAAAGGATTTCGTGCTTATTATGATTCTGGGGACTGCCGTGTTCGTTCGTACGGTGGTAATGGCGGTGGAGCATGTTGTGTTTTCCCTTTCACATACAAAGGAAAGCTCTTCAACGACTGTGCAATACAAGACGATGCTCACCCCAGCAATCTCTGGTGTTCTGTTACTCCTAATTTTGACAGGGACGAAAAGAGAGGATTCTGCATCGCTGAAGATGTTCCCTGTGGTGTTGGGAAGTTTGAATGCAAGAATTATCATTGGTGGAAACAATGTATTGACATGAAGTATCGCTGTGACGGAAATCCGAATTGTGCAGACAACTCCGACGAGAAGGATTGCCCACTCATGGTGAACCCTGATGCATGCGTTGTCTTTTACACATTGAAATTTCCAAATAATAAGAGTAATGTGGCTTTTAAAATGGACAGAAACTGTAACTATGAAAACCGCTGTAATGCGACAAAAAATCAAGGTCCTGGTAAACCTTGTAATTTCAGCGATTCATTCAAGTGTAGAAACAATCTTTGTGTTCCGAATTACTGGCGATGTGACGGCAAAGACGATTGTGGAGACAGGAGCGATGAACATGATTGTCCTTACGAATTCGATACCAGCAAAGAGGCTTGTAGCTGGACAGGCCACTGTGTCAAAGATGGTTGGGAGGCTCATCTTGGAAACGAAACACCTGTCATTAAATCGCTTGCTATTTGTAGCAGGAAAAACATCACAGCAATACCAACTTACCTTCCTACCAAGTTAACGGTCTTGTTGATACCTGGGGGGAAGATAGCACGAATTGAAAAGTTCAATTTCGCAAGATACAGCTCTCTTCGTAAAATTGACTTAGAAAGAAACCAAATAACGAGTATAAAACCACATTCCTTTATCAATCAACGCCAACTGAAGACCTTGATATTAAAAAGCAACAAGATTCGTGTACTAGAAACTGGTACCTTCAAAGGACTCGTCAAACTAACTGAACTAATTCTCTCGGATAATCCCATTGAAAAGATAGAGAAGGGTGCTTTTTATGGTCTTGAAAAACTGCGTTCTCTGAATTTAAGCAACATGAAGCTCTCTTCAATATCCTCTGGGGCTTTCAACGGAATGGATTCTTTACGTGAGCTATACTTAGGTAACAATGAAAACTTACAGCAGCTACCACTGGATATATTTAGCAGCATTTCACTTCGCTTCCTACAAGCCGACAGATTTGAATTTTGTTGCATAGCCAGACTTTCTGGACCACAATGCGCCGCTCCAAAGGACCTCTTCTCTTCTTGTAACAACCTGATGGCTAACATGACATTGAGGCTATCCATATGGATTCTGGGAAGTATAGCGCTGTTCGGCAATGCCTTTGTACTTCTATGGCGGTTGAAAACAAAGAGTGACAACAGAGTGCATGCGCTGTTGCTGTTGAACCTCGCAATTGCTGACTTTTTTATGGGAATCTACCTAGCTCTGATTGGTTCTGTGGATGCTTTTTATCGCGGCAGGTACTTTATATACAACGACAGATGGAAGCACAGCCCCTTGTGCCAGTTCAGCGGATTTGTGTCCACATTATCGAGCGAAGCGTCCGTGATGATATTAACCATTATGACATTGGATAGATATGTCACCATTGTACACCCATTCAAGCATTTTGGATTGAGCATTCGCGGAGCACACGTGACATTGGTCATCACGTGGATAGCCGCGTTTGTTCTCGCGGGAGTTCCACTCACTGGTATACCTTACCTCAAAGAATTTTACGCCCGCTCTGGTGTTTGTCTTCCTCTTCATTTAACAGCGGATAAGCCAGCGGGATGGGAGTATTCGGTGTTTTTATTTTTAGCCTTAAACTTTGCATCTTTTATGATTATTTTCTTTCTCTATTTAATCATGTTTCTAAAGATTCAAAAAACTCGAAAACTGAGTGGAGCGGGACCGGCCGTTTCATCCATTGGCTCGAGAATGGTCTTCATTGTTTTAACAGATTTTTGTTGCTGGATTCCTATAATCATCATCGGCATAGCTTCACTTGTTGGTATGGAAGCTCCTCCATCAGTGTACGCTTGGGTAGCAGTGTTCGTTCTTCCTCTGAACTCAGCGTTAAATCCGATCCTCTACACGATCTCCACCGCAAATTTTCGTCGGAAATTTCGTCGCACCTTACGAAAGGAAATTCCGATGACGATCGCTTCCGAAAATACTTATATTGAGTCAAGAACTATGGATTCCGGACATGTGCGGTCGGTCTTTCTATCTGCTTCCAACGAAGAATCCAATTTGCTGAACGGCAGAGTCAACGAATCGGGCGTGTGAGCTGCGAATGCTTTACTAACCAAGAGGCACCAGAAAAGAGAACTCCTGGTGATCTCTATTTTCACGCCAATTTCGGTTGTTCAAACGTGGATATACCTCTATCCATTCCATACAACTCTGTCCGGCTGATAAGCGTTGTCAAAACTTAAACAGTTAGTCGCAATAGTCAAGTCTAGTCAAGATAAAGCGATAATAGAGGTATGTTCAGAATTGCATGTAGTTTGATAAGATGCAtatttcctctcccttcttgctaaaattcgccatcacttctgacaagaagtacggacaataaaggtgatCGATtagg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P46023	G-protein coupled receptor GRL101 OS=Lymnaea stagnalis OX=6523 PE=2 SV=1
Q91ZZ5	Relaxin receptor 2 OS=Mus musculus OX=10090 GN=Rxfp2 PE=2 SV=2
Q8WXD0	Relaxin receptor 2 OS=Homo sapiens OX=9606 GN=RXFP2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000139 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00057 all species →	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan
PF00040 all species →	fn2	Fibronectin type II domain	Domain	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR002172 all species →	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR013806 all species →	Homologous_superfamily	Kringle-like fold	Interproscan
IPR036055 all species →	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR000562 all species →	Domain	Fibronectin type II domain	Interproscan
IPR002131 all species →	Family	Glycoprotein hormone receptor family	Interproscan
IPR036943 all species →	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR023415 all species →	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24372 all species →	GLYCOPROTEIN HORMONE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016500 all species →	Molecular Function	protein-hormone receptor activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007190 all species →	Biological Process	activation of adenylate cyclase activity	Interproscan
GO:0008528 all species →	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0009755 all species →	Biological Process	hormone-mediated signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04307	RXFP2, LGR8; relaxin family peptide receptor 2	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.