Gene detail

Detailed information of aacu_s0075.g63.t1 in Acropora acuminata

Genomic Location: sc0000075_pilon:792713...805022
NR annotation: XP_029191654.2, alanine--glyoxylate aminotransferase 2, mitochondrial-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0075.g63.t1

GTTCCACTGTTGTACTCTGTTGTACCAATTTTTTTTTGTTGTACCTCGTTTCTGAGTAACTTCAAATCGAGGCTCAGCTATCCCAGCACGGGAGACAGTACGGCATTTTTCTCAGTCATGTTTCGAAGGCTTTGTGCGTGGAGAGAACCACGTCATTGTCTTGCGTTTATCGATTCAAGATGCAGCTGTTCCGCGGTGTTTGGGTTAAGATGCAGCCAGAGGAGCGTACAGACCAGTTCAGGCCCAGTACATCAAAAGGTTGCACCCATGGATCCAGGATTAGAAATGCCAAAATGTGACTTTGAGCCTGAACCATATCAGGGGATCTCATTTGAACATGCCAAAGAAGTGAGAAAGAACTTCCTTAACCCTGCATTGTTTACATATTACAAGAACCCTGTATTCATCTCAAAGGGTCACATGCAGTGGTTGTGGGATAATGAAGGCAAGAGATACCTGGATTTATTTGCTGGCATTGTAACTGTTAGCGTGGGACATTGCCACCCTCATGTTACTGAAGCTGCCAAGAAACAGTTAGATACTTTGTGGCACACAACAAACATTTATTATCATCCAACCATTCATGAATTTGCTGAGCTTATGGTGTCCAAGATGCCTGGAAACCTGAAGGTCTGCTATTTTGTCAACAGTGGAACTGAAGCCAATGACATGGCAATTATGATGGCAAGGGCACATACAGGAAGCTATGACATGCTTTCTCTAAGGAATGGATACCACGGTACTAGCCCCAGCACCCTGGGAGTTCTTGCACACAGCACATGGAAACTCAACGTTCCTGTTAACTTTGGCTTTTTCCAGACCATCAACCCTGATGTATACCAAGGTCCATGGGGAGGGGCCAACTGCCGAAATTCTATTGCACAGACAGACCGACCCTGTGACTGCTCACCAGGTCATTGCATGGCATCTAAGATGTATGTTGATCAACTTAAAGATGTTTTGGTGCATTCCACCGGCAAGAAAGTCGCTGGATTTATTGCTGAGCTTATTCAGGGTGTAGGAGGTGCAGTTCACTTACCCAAAGGTTTTCTCAAAGCTGCATATGAGCTGATCCGCGAGCGAGGTGGAGTGTGCATCGCAGATGAGGTTCAAACAGGATTTGGTCGCCTTGGTACCCACTATTGGGGTTTTGAAACTGAAGGTGTTACTCCAGATATCGTGACTATGGCCAAAGGAATAGGAAATGGTTTCCCAATGGCTGCAGTAGTAACAACACCGGAAATCGCCAAAAGCTTTGCTCAAGCTGTCCATTTCAACACATTTGGTGGGAATCCCATAGCCTCAGCCGTTGGGAAAGCTGTGTTGGAGGCCATTGACCAAGATGGCACGCAAGAGAATGCCAATGTTGTTGGAAACTACTTTCTGGAGAAACTCCTGCAAGTCAAGAGTGAGTTCCCGGATGTAGTTGGTGACGTCAGAGGCAGGGGGTTGATGATTGGTGTCGAGCTAGTGACTGATAAGGAATCCAAAACACCTTTACCAGCGGAGAAGTTTGTTCCCATTTGGGAAGATATCAAAGACATGGGCGTCCTGATCGGCAAAGGTGGACTTTATGGAAATGTGTTTCGTATTAAGCCACCAATGTGTATAACCAAGGAGGACGTTGACTTTGGTATTGAAGTGATGAGGACTGCGCTGACCAGATACACTCTAAACGAATGAGTACAACCCGAAAAAAATATCAGGAGCCAAACAGGAATTTTGAAGCGAGTAGCTGGAGAGTTACAAACTTGCATACTAGGACAACCAAGGCTTGTTTTTGCACGCGGACGATTCCTACAGTAGATTTTGTATACTAGGTTATGAGatctatatatatatatatatatcatatatctatGAACTGTGCTTTGAAGAGGGCTGCTCACGCTGGATGAGGCATGCAGATATCATAAACAACCAATCTTTTTAAAATCATACATCGTGCGCGTAATCAGTTGGTCAGTCACCGTTTGCCATTATTTTGCCATCAAAATCATTTGTATAGTCATTTTCCACGTCTTCATGTAAAGCCGTAATTCCAATATTTCTCAACAATTTGGCTAGGTCGAAAGGCCAAGGATCAGTTCAAAATTGATGGTCATAAGAAACGGGAATTAATTACTCCCATTTCTCTTGTTTTTCTTTCTGGAAGGCGATACATGCTTCTTCTTGAAGGAATGAAAATATTTGATGTGATCATGATGTAAAAAACACACCAATTGATTTCCACACTTTGAAGAGACTGAATATATGACGTGATAGCCTAGCTGAGCCCGAAAAGAAAGGGTTTACCTCGGTGTAAGAACCTTTCAGTGTCTGCTTCGTTTGCTCGTGCTGAGGTTTGTTATtagggggctaaggcaaatatgacgtcaacggaagcgagaacgtcatctgaaaatgtaacttcgcgtttctgcagtctcttttcaattattcaaagtcatcatgcttgaaaaatgtgttctaactatcctggaattaaattggaaccagcgcttgggacataagaagacaaaattgaacaattgtcatcatatgctcacgtctcccacacaactgcaaaacagatcatttcacgtcgtagaaagaacgaaaacgtcttcaaaatgtcaaaagatgaaaaatgcacgtgcaaaaatactgtttttcattgtcaaatatgcaaatttgtaggggtttttgttgccgtcgtcgtcgtggttgctcaagctcccttttgtctcaatagtCCCATGATGAATTGGCTCTTCTTTTCCTTGTTTTACATCATCCGCGAGTGTGAGAGGTTCTTAAACAGAGGATGTGCCGAAAGAAGTCAGACAGAAATTGTATCACCCGGAATCAATGTTCTGGAGTTCACTGCAGTTTTATTGTGTTCATATGTAAAGGAGATTCGATGCTGAAGAAAATTAGGGGAATAATAGCGTATGGAAATAAAAACCACTTTAAAGC

Protein

Uniprot

Uniprot term	Description
Q17QF0	Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Bos taurus OX=9913 GN=AGXT2 PE=2 SV=1
Q9BYV1	Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Homo sapiens OX=9606 GN=AGXT2 PE=1 SV=1
Q5RFA3	Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Pongo abelii OX=9601 GN=AGXT2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00202	Aminotran_3	Aminotransferase class-III	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049704	Conserved_site	Aminotransferases class-III pyridoxal-phosphate attachment site	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR005814	Family	Aminotransferase class-III	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45688	ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0008453	Molecular Function	alanine-glyoxylate transaminase activity	Interproscan
GO:0009436	Biological Process	glyoxylate catabolic process	Interproscan
GO:0019481	Biological Process	L-alanine catabolic process, by transamination	Interproscan
GO:0008483	Molecular Function	transaminase activity	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00827	AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase	EC:2.6.1.44 EC:2.6.1.40	Amino acid related enzymes	ko01007	deepkoala