Gene detail

Detailed information of aacu_s0097.g24.t1 in Acropora acuminata

Genomic Location: sc0000097_pilon:277616...281618
NR annotation: XP_029188821.1, zinc finger matrin-type protein 5-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9UDW3	Zinc finger matrin-type protein 5 OS=Homo sapiens OX=9606 GN=ZMAT5 PE=1 SV=1
Q9CQR5	Zinc finger matrin-type protein 5 OS=Mus musculus OX=10090 GN=Zmat5 PE=2 SV=1
Q2TA39	Zinc finger matrin-type protein 5 OS=Bos taurus OX=9913 GN=ZMAT5 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00642	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	Family	Interproscan
PF06220	zf-U1	U1 zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR013085	Domain	U1-C, C2H2-type zinc finger	Interproscan
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan
IPR003604	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16465	NUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005689	Cellular Component	U12-type spliceosomal complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13152	ZMAT5; U11/U12 small nuclear ribonucleoprotein 20 kDa protein	-	Spliceosome	ko03041	deepkoala