Gene detail

Detailed information of aacu_s0121.g18.t1 in Acropora acuminata

Genomic Location: sc0000121_pilon:157317...162585
NR annotation: XP_029179837.2, short-chain dehydrogenase/reductase family 16C member 6-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A5PJJ7	Short-chain dehydrogenase/reductase family 16C member 6 OS=Bos taurus OX=9913 GN=SDR16C6 PE=2 SV=1
Q7TQA3	Epidermal retinol dehydrogenase 2 OS=Mus musculus OX=10090 GN=Sdr16c5 PE=2 SV=1
Q05A13	Short-chain dehydrogenase/reductase family 16C member 6 OS=Mus musculus OX=10090 GN=Sdr16c6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00106	adh_short	short chain dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002347	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR020904	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24322	PKSB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15734	SDR16C5; all-trans-retinol dehydrogenase (NAD+)	EC:1.1.1.105	Retinol metabolism	ko00830	deepkoala