Gene detail

Detailed information of aacu_s0121.g61.t1 in Acropora acuminata

Genomic Location: sc0000121_pilon:726567...740663
NR annotation: XP_044181436.1, uncharacterized protein LOC114970861 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0121.g61.t1

CTGAGTTGAAGACATAGCATCGCATTCAGGGGTCAGCTACGCAGTGCTCACATCAGACAGTGCAATTTACATAAAAGATGAAAACCTTTGGCTGGAGAGCAGTTTCCGTTGCTCTAATAATTGTATTCTCAGATGCATTGGTTAAAGCGCTTACGCCGGACAACGAGGCAACTGGCAGAAAGCTTAACAAGAACGCACATTCAgcatatttcattcaaaacgacttctcctacctaaatatcaaggcaattggcacaagtcttgttgtgcagagcattcagtgcgcattgacgtgtttacaacatctgtcctgcttttcatttaacttggctactttcccggatgacaacggtaaactgctatgtgaacaccttccttcggacaagtacaacaattcaaagaagtttgtttcgagcaaaaattaccaccatttcagcatctggtcaccatgcttcagtgcgccttgtaaaaacaacggaaaatgtctgccactattcaaaGAGCGGAACAATTATCTATGTGTCTGCAAAAGGGGATTCACGGGAAAACACTGCGAACGCGCATCAgagtcttgcaaggacatctgggacatgggtgcatccaaaggagacgggaagtactggatcgaccccgcgaacgatggaaagcatctaaaagtcttctgtgacatgactactgacggcgGAGGCTGGCTGCTCGTCTCCAGACTGCATAGTATGCACAACTCCACTCATCCATCTCAGTTGCCATGGGAGACTTCGTATCGTGGACTAGCGAACAGTCAGATGCTTCTCACACAAACTGCCATGAAAGAGCTAAGAAGACTTATCAATTTCACTCAATTGAGATTTCACTGCAAGAAACAGATCCCAGGCCGCACAATCCACATCGCCACAGTTAAGAACAGTTCGGGTGAAGCTGTCGTCCAGTACTTCAGCGGTCAGACAGATGTTTTGCCTTATGCTTGTGGTTCTTTTTACAAAATGAATAATGATAACTCGGAGTTAGCCAACAAGTGCCAGAGGTGGGGAAAAGATAAAGAGAAATACAAAGTCGGTAAATGGGGGCACGTAATGGACGGGACATTTGGAAGTGATCAGAACGAAACCAGATTATTCGACAGCGCTATCCTTGTGGGATCAAAGtcttgtgaggacctccgcgacaattcattcaacgcattcaacggagacggcgagtactggatcgaccctgcgaacgatggaaagcatctgaaagttttctgtgacatgactactgacggagGGGGCTGGCTGCTTGTCTCCAGACTGAATGTCACGCAGAACTACCATCCTCAATCTCCGTTGCCATGGGTGACTTCCTACCGTGGAATAGAGAATCAGACGCTTCTCACACAAACTGCCATGAAAGAGTTGAGAAGACTTATCAATTTCACTCAATTGAGATTTCACTGCAAGAAACAGAATCCCGGTCGCACATTTCACATCGCCACAGTTAAGAACAGTTTGGGTGAAGCTGTCGTCCAGTACTTCAGCGGTCAGACAAATGTTTTGCCTTATGCTTGTGGTTCTTTTTACAAAATGAAGGACGATAACTCGTATTTAGCCAACAAGTGCCAGAGAGACTGATAAGTTATGCGATCTGAGTTAAGTGTTTCTCAATTAATGATATATTACTTGTTTTCTCGCTCTCTGTTTCAACTCAAGCTCATTTAAAAGCGAAGCATACATAAACCATAAATTGCAATAAATACAAAATCCTAATCATTTAGAACCGTTAAAAACAAAATAAAAACTAATCAAGTGTCTAATGGTATATAGTTTTGTCTTGAGCGAATCATAGTTTGTTGCTCCTCTTTGGTTCCACCAATCCGGTCAGCAGGCAGTTTTGTGTTTCATGTAATACAGCTACTTATCTTTAGCAATAAACCTCGAGTGTAAAATTCGCCCCGGTCATGGGGACTCCAGATGCTCTTGACACAAAACATGCTTTCGAATAATCACCGAAGTCTACAGTCTCATTTGCTTGTCTAAATGCTACGATTGTGATTCCCCTTGAAAATGGCTGAACTTTCCCATCGTTTCCAGGAACCCACAGACTGTTCAAAAACTAGTTGGGACTATTTCCCCTATCTTGATTTCTTATCTGATATAGTGAAGAGATTCGAACTGTGATGCTACCAGCTTTCCTAGCTGTGCGCACTCTCCAGGAGTCTTTCACCCTGGTCTGCTGTAGACGCATACGGTAAACGACTGGGGGAGGGGTCTGTCAGCAGCGTCACCTAAACGAAACAACAAAACCACTTGGATCAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16146	INTELECTIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0070492	Molecular Function	oligosaccharide binding	Interproscan