Detailed information of aacu_s0125.g12.t1 in Acropora acuminata

Genomic Location: sc0000125_pilon:159567...181935
NR annotation: XP_044168837.1, LOW QUALITY PROTEIN: polycystic kidney disease and receptor for egg jelly-related protein-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01822WSCWSC domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF00801PKDPKD domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR000601DomainPKD domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR051223FamilyPolycystinInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR042060DomainPolycystin-1 like, PLAT/LH2 domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04988PKD1L2; polycystin 1L2-Ion channelsko04040deepkoala

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