Gene detail

Detailed information of aacu_s0129.g31.t1 in Acropora acuminata

Genomic Location: sc0000129_pilon:800764...820603
NR annotation: XP_015764606.1, PREDICTED: fibroblast growth factor receptor 3-like isoform X3 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0129.g31.t1

AGTTGTGCACTAACTCTTCACAGCACTTCTTTCATGAATTTCAAGACTTTTGCTTGTAGCAAAATGAATGAAGTTCCTGCTATCATCAAAGTCAGAGTCTTTACTGTGAACAAACAACCAAGCTTTGAGTTTAATCTGTCAATGTTTCCTTCACCAGAAACTACAGCAACAAAATTTGTGGTAACACCTTCCAATCCCTCATATGCAGTTGAAGGGCAGGAATTCCTTCTTGAGTGGACCTATACTCTTAGTGGCGGTGTTGGCCTTGTACAGTTTTTTAATGTTTCTGGAAGTGGATCTGATTCCATTGGAGCAAGATTTGGCCCTGGTGTGATAAGCAGCACACCAAAGTATGCGGCACGGTTCAGGGCACAAGCAACGAGCACCACAGCAGAACTGAGGATACTAGCAGTGCAATTATCAGATGAGGCAACTTATCAACTGAATTTGATTTCAAGCGATGCTACAGCTATTTCAAACAATGTGAAAGTTATTGTGCAGTATGGTGCTCAACTAACTTGGAATGAGCCTTTACCAGTTCTAAGCGTTCAAGCATCAGATTCTCACCAGGAGGTTCACATAAACTACACAATGCTGATTGAAGGCAGCATTAATGCGTCCTTGAGCTGGTATTTCAGCTTGTCATCGGGCTTAACCTTACTTGGTGTAAATTTAAAACTGAAAACAGATAACATTGCATTTGTTAATAATCAAAAGCAAGAGGTATCAGCAGGCTTTAAAGATAAATATGCTATCAGCTGGATTCCCAACCAAAGAATTACCCTAGTTATCTTCAAGGTAACAAGTGAACATAATGCCACATTTGCTTGTGAAGTTATTGCATCAGGAAATGCCATATCAACCTGGAGGAGCCAAGTTCAAGTGGTTGTTGTTGTTCCTCCGAAGGTTATACTTGCACGGAAAGTCTTTGTCGGCCGTGAACAGAATGCATCACTTAAATGTGAAGTGGAAGGAAACCCAACGCCTACAATTTCCTGGAGTCCTTGTGATGTAGGAAATCTTCCTTGTGATAAACAATACTTGAATATTTCTAAAGTGCAGGCGGCGCGTGCCAACTACACCTGTACAGCAAAAAATTATCTGGGAATAGACTCAGCAACCACAGTTCTTGTTATTGGAGGAAAGAATATTTACTTTAGGCTGAGTGTAAGTGGAGAATGTGACAAGAAGGTATCTGTTTGGGAGACACTAGTGAAAGAGCTTGTCAAGGTCTTTGCCAATGTTGCAAGTTACTCTGGAGCTGAACTGATGAAAGTAAGAACTGAGAAATATGAAATTTCTCCAGCAAGACTTGTCAAAGCTGAAGATGCACCAGAAAGCAGCATTTCGAGACCTACATATGTGAACTTGCAAGAGGTAACTCTGCATTCTAACATGGATTCTGATCCACCCCACAAtgaatatgcaccacttgatttgaggacgcgctcttgggaagtagcaagagaggatgtgatagtagaaaagatcattggtaaaggggcttttggtcaggttgccaagggaacggcaaagaacctatcgttcagatctggcaagggaaatgttgccattaagatgataaaagcaaatgcgcctgaatcagacaagcgagacttgaaatcagaactggagctgatgaagacactcaagccgcatccacatgttatcaaactgctgggatgtgtcactgaatctgAGCCCCTGTTGGTGTTGATCGAGTATGTCCCGTATGGTGATCTCCTTGGTTACCTGAGGAAGAGCCGTGGATTGAATGATACTTACTACAAAGACCCGGATATCAAACCCAAAACCAGTCTGACGTCACAACAGCTGATGAAATTTGCTTGGCAAATTGCTGATGGAATGAGTTACTTATCACTGAGAAAGGCAAGTCACAGTTACTTGAAAAAAACTCCCGTTTTTAAATGAGCGGTGTGTCTATAAATACTTCTTAGTCTTGGATAACTGCTAACATTTGACAAAAGAAGAGAACCAAGGAAAAAACTCCTGTTTAAAGCATCTGTAACGCAAACTTTAATCACTGTGTCCATATCCATCTTTTGAAATGTCCCAGCATTTAATGGACAGAAGGCAATTGAAAAGAAACATGCTCTTAAGGCGGTATACTTATGAACAGTTGCAACCTTTGGATATCGCATGTTCTCTATCTACCTGGGACCTTTTTTATGGAGTTATGGAGTTGTTCTTTATGAAATATTTACTATTGGTGGTTCGCCATATCCACGCATGGATGGCAGGAAAGTTGTCAGTTTCCTTCAAGAAGGCCACAGGATGCATAAACCAGAACACGTGGACAATAAATTGTTAGTCGAAAA

Protein

Uniprot

Uniprot term	Description
Q9VBW3	Tyrosine kinase receptor Cad96Ca OS=Drosophila melanogaster OX=7227 GN=Cad96Ca PE=2 SV=2
P09619	Platelet-derived growth factor receptor beta OS=Homo sapiens OX=9606 GN=PDGFRB PE=1 SV=1
Q05030	Platelet-derived growth factor receptor beta OS=Rattus norvegicus OX=10116 GN=Pdgfrb PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan