Gene detail

Detailed information of aacu_s0189.g19.t1 in Acropora acuminata

Genomic Location: sc0000189_pilon:352816...359766
NR annotation: XP_015777198.1, PREDICTED: neurogenic locus notch homolog protein 2-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P82279	Protein crumbs homolog 1 OS=Homo sapiens OX=9606 GN=CRB1 PE=1 SV=2
P78504	Protein jagged-1 OS=Homo sapiens OX=9606 GN=JAG1 PE=1 SV=3
Q9QXX0	Protein jagged-1 OS=Mus musculus OX=10090 GN=Jag1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005112	Molecular Function	Notch binding	Interproscan