Detailed information of aacu_s0190.g32.t1 in Acropora acuminata

Genomic Location: sc0000190_pilon:463850...497059
NR annotation: XP_044164572.1, exosome RNA helicase MTR4-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P42285Exosome RNA helicase MTR4 OS=Homo sapiens OX=9606 GN=MTREX PE=1 SV=3
Q9CZU3Exosome RNA helicase MTR4 OS=Mus musculus OX=10090 GN=Mtrex PE=1 SV=1
O14232ATP-dependent RNA helicase mtr4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mtr4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21408MTR4-like_stalkExosome RNA helicase MTR4-like, stalkDomainInterproscan
PF13234MTR4_beta-barrelMtr4-like, beta-barrel domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR048392DomainExosome RNA helicase MTR4-like, stalkInterproscan
IPR025696DomainExosome RNA helicase MTR4-like, beta-barrel domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR050699FamilyRNA/DNA HelicaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12131ATP-DEPENDENT RNA AND DNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0000460Biological Processmaturation of 5.8S rRNAInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan

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