Gene detail

Detailed information of aacu_s0194.g21.t1 in Acropora acuminata

Genomic Location: sc0000194_pilon:542918...548608
NR annotation: XP_029197409.2, zinc finger protein 367-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0194.g21.t1

CATGAAATGTTTACACGTTCACGAAAAAACGCGTTTCGCTGATCTTCGTAAAGGTAAAAACATCCGCTTTTGTCCTGAAGAAAATTTGCTAAATTTGATTCATATGGAGGAAAGTGTTATCTTGTTAAAAAGAGGTTGCTAAATCCAGAAAATACTTCCACCACAATTTTGGCGCGTTCTCTTTTAAATATTCCTCTAGCGTGACGTATTGTAAATACATTACTCAAAGGCGGGAAATTTGGTTCATCCGTTAAAAGAGCTGTATCGTTGAGCTGAGAAGTTTAAAAATGGCTGACTTCCTTTCGTCTCTTCAAAAAAGCGGTGTTTTCTTTCCCCAGCCTGGAAGCAACTTATTTTCGGTGGCAAAACCGCAGCTTAGGCCAGTTCCAAACTTGGAAGATCTCTACGGACAGTTTAACACGCATCAGAGCCAACGGAGTTCGGTGATAGTGTGGaacccaccaacaacaccaaccaaccaGTTCTCGCCGCCTACACCACCTCAAACTCCAACTTCACCACAAGGAAACACCCCGGCCGATCTCTCTCCGAAATCGCCGAATAATGCTCCTCCGAGAGGTCGACCAAGGGCCGATGTCTTGAACGTTTTGATCGAAGAAGGTCAAAACTCGTACTCATCAATTCGCTGCGATGTTTGCAACAGAGTTTTCCCGCGCGAGAAGTCCCTTCAAGCACACAAGAGAACTCACAGCGGAGAGAGACCGTACGTTTGTGACTTCCCAAACTGTGGAAAAGCCTTCGTTCAGAGCGGGCAACTAAAGACCCATCAACGACTGCACACTGGAGAGAAGCCATTTGCTTGCACCGTAGAAGGTTGCGCGACACGTTTCACTCATGCGAATCGTCACTGCAATCTTCACCCCTATGCCAGCCTCAAGCGAGTTTATACTGACATTCCTCTGAAGGAGATCTTGAAGAATGAAAATTCAGAACCTAACGAGTACAAAGCGGCTGTAAAGCAGTGGCTAGTGAACTATGAATCGGAAAAGGAAGAACGGAATCCAACAAGGGTGGAAGAAAAGGTATTAAAGCGAAAGCTGGAAAAGGAAATTGCACGACAGCAAATTATGGAGAGAAAGAAATCGCGGGTTGAAGCACGTAAAAGAATGGCAGATGCCAGAGAAAGATGGTATGGAGCTATGGCTCTTGTTGAACTGGCTGACGCCCAGTTAAACTGTAATTAGAAAATCACCGATCAAGCATTGCGTGGCTTCTGTCGTAAACAACTTTTAGCGGGCCAACTTTAAAGACCATACATAGTAATCGTATTTTATCTCGTAAAACGATTGTGTAATTTTGTGTTGTTTTTTTTTACGATTTAGAGCCGTGTTTTTAATATTAGTGTCGTTATTTCTTGAAAACCCTGTCTACTTTCACGAGAATTTTCCGCGTGAAATATTTTTTAATTGTTTTTTAAAAGTAATTATGCACACAGTGGACAGTTTTAATTAATGAGCAATGAGACGTACATATTTTCCCCTTTTGTAAAAAGAATAATTAGACTGGAGTATAAACTATAAACGTCTACATATTGTACAGAATTTAAAAGCTAAAATTGTAGAAAAAATATTTATTTTGTAGAAGTTTCCAAACCTCCCTTGAGCTATTTAGTGAACATTTATCATAAATTATTAACAAATGCTAATGAATTGCTTATATGCTTTTTCTTCGGTGAATTGTTTCTGTAATAACTAATAAATGATCCATTTGTAATAACAAAAATGCTTATTTAAAACAATAAAAGCGTTAATTATTCCGTATGAACCTTTGCACAGGCATTTACAAAACCATTAATTCATGAGAGATGCAGCCAAATTATGCACAGCCCCATGTGCAAAAAGCATCAAAATAATCTGAAAACAGACCTACCACCAAAACAGGTTGAAATACTATGATTAAGTTTATGCTGAAAAATAAATGATGGCCATATTTCGGAACCAACAACATGATTGGCCACCTTGCCTTCAGTGAAAAAAAGGGGAAGTTTTCACCCCAACAAGATGAGCTGCTTCTTCTTTATTATGAACCATATTCCGGGCAATGATATAATTATGTAGAACTTGACACGTTATACCTAATTGTTTGTTTTTTCACGTCAGTTGCAGCAAAGAAGCAACATCTCATACCATACTAGGAAGGTAGAATAAGAATATTTTCCAGGTTTATATCTAGCAGAACCGCTCGATTTCCATAATAATTATAATTTGTAAGAAATTTTAAGCTGCAAACATGAATCTTTGGTTACTCTACTAAGTTGGCTGATACATGGGGTACTCACTATTTTCAGCTGATTTTATTTTTTTTGTCCAAAGAAGACCATCCATTTTTACTCAGTGAATAACAATTAATTCTTGGTTGTCTTAAACAATTTCATAAAGGGTAATTTGCAGAATGCAGAACAAGATTCAGTCATTGAGTTTCTTCACATCATGAAACAAATAAGAAATAAAGACAAGTGTT

Protein

Uniprot

Gene family

Uniprot term	Description
Q5U2Z0	Zinc finger protein 367 OS=Rattus norvegicus OX=10116 GN=Znf367 PE=2 SV=1
Q0VDT2	Zinc finger protein 367 OS=Mus musculus OX=10090 GN=Znf367 PE=1 SV=2
Q7RTV3	Zinc finger protein 367 OS=Homo sapiens OX=9606 GN=ZNF367 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13912	zf-C2H2_6	C2H2-type zinc finger	Domain	Interproscan
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23235	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan