Detailed information of aacu_s0209.g41.t1 in Acropora acuminata

Genomic Location: sc0000209_pilon:596475...614569
NR annotation: XP_029179574.2, uncharacterized protein LOC114947057, partial [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BNA6Protocadherin Fat 3 OS=Mus musculus OX=10090 GN=Fat3 PE=1 SV=2
Q9H251Cadherin-23 OS=Homo sapiens OX=9606 GN=CDH23 PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00558VpuVpu proteinDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR008187FamilyVpu proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0019076Biological Processviral release from host cellInterproscan
GO:0032801Biological Processreceptor catabolic processInterproscan
GO:0033644Cellular Componenthost cell membraneInterproscan

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