Detailed information of aacu_s0211.g36.t1 in Acropora acuminata

Genomic Location: sc0000211_pilon:351736...359880
NR annotation: XP_029198290.2, tRNA selenocysteine 1-associated protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1RMJ7tRNA selenocysteine 1-associated protein 1 OS=Bos taurus OX=9913 GN=TRNAU1AP PE=2 SV=1
Q9NX07tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens OX=9606 GN=TRNAU1AP PE=1 SV=1
Q5R462tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii OX=9601 GN=TRNAU1AP PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF17654Trnau1apSelenocysteine tRNA 1 associated proteins FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR040434FamilytRNA selenocysteine 1-associated protein 1Interproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR041085DomaintRNA selenocysteine 1-associated protein 1, C-terminalInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37457TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0001514Biological Processselenocysteine incorporationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25102TRNAU1AP; tRNA selenocysteine 1-associated protein 1-Transfer RNA biogenesisko03016deepkoala

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