Gene detail

Detailed information of aacu_s0237.g12.t1 in Acropora acuminata

Genomic Location: sc0000237_pilon:165406...183680
NR annotation: XP_015761632.1, PREDICTED: nucleolar protein 58-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0237.g12.t1

CACGATAACGAGACCCTTCATCAAAACGAGGAAGCAAAGTTCGCTCCACGTGCAGTTCTCACGAATACTTGTGCGAAGTAATTGTCTTTATTTTTAACGAGATATTTCGCTTTATCGACGATGCTAGTGCTGTTTGAAACGCCAGTAGGCTATGCAGTATTTAAGCTTTTAGATGAGAAGAAGTTACAGCAAATAGATAATCTTTACAAGGATTTTGAGACCCCTGAGATGCTGCAAGCAAAGTTGTTAGACTCAAGCACTTTGAAAAGTTCAGTGACACAACTCAGGCACTGGCAGCGCTGACAGCAACTCAGTGGAAGGAAAAATGAGCAAAAGTCTTAAAAAGGTCTTAAAGAAAATTGTTGCCAAGGATATCCACCAAGAGTTAGCTGTGGCTGATGCTAAGTTGGGTGGGGTCATTAAGGAGAAATTTAGTTTGAGCTGTGTAACAAGTTCTGCTGTGCAGGAGCTCATGCGAGGAATACGATTGCAGCTGGATAGTTTGATATCAGGTCTTCCTGGAAAGGAAATGAGTGCAATTGGCTCACAGCCTGTCTCGGTACAAGCTCAAGTTCAGCCCAGACAAAGTGGATACTATGATTGTCCAAGCAATTTCGCTCCTGGACGATCTTGACAAGGAACTCAACAACTATGTGATGCGCTGCCGAGAGTGGTATGGCTGGCATTTTCCTGAGATGGGCAAGATTGTGACTGATAACTTGGCTTTTGCGAAGACTGTGAAGACGATGGGAATTCGTCAGAATGCTGAGAAAGTAGATTTGTCTGAGATTTTGCCTGAGGAAGTAGAGGAGGAAGTGAAGGCTGCTGCAGAAATATCTATGGGAACTGAGGTGATTGACATAACAGACTATCGTGTTCAGCTGTTTGTCTCAGAAACCGCATGACTGCTATTGCTCCGAACTTGACGGTTCTAATCGGAGAACTCGTGGGGGCCCCGACTCATTGCTCATGCTGGTTCTCTTCTCAATTTAGCCAAGCATCCTTCCTCGACGGTGCAGATATTGGGGGCTGAAAAGGCTTTGTTCAGGGCTTTGAAGACTAAACATGACACCCCCAAGTATGGTTTGATTTTTCATGCGACTCTTGTCGGCCAGAGCACACCCAAGAACAAAGGAAAGATTTCAAGAATGCTCGCTGCCAAGACATCGCTTGCCGCCAGGGTGGACGCTCTCGGTGAAGATGGTGATACATCTATGGGAATTGAACACAGAGCAGCGGTTGAACTCCGGTTGAAGGCGCTTGAAGAAAATCAGCTGAGGCGAATTAGTGGAACTGGCAAAGCTCAAGCGAGAGTGGACAAGTACGAGAACAAAAGCGAAGTGAAGACCTACCAGCCCGCTACCGACTCGACAATCCCATCAACCGGAAAGAAACGAAAGAGATCAGAGACAGAGAACGGCGAAGCCGCTGAGCCACCAGCCAGTGCACCAATAACACCAAGCACCCCAGCTACCGAAGGAGATGAAGGCGAAGCACCGGCAAAGAAATCCaagaaagaaaagaagaagaaaaaagagaaggaggcaaaaatgacggaagaagaaccagaagaaCAGGCGGAAACATTTTCTGTAGCGACACCGaaaagtgaagaaaagaagaaaataaagaagaaaaaagaaaaaaaGGTTGAGGATTCCGAATAGAGGAAGAAAAACTACTAATTCTAGAAGCTTGTAGCTGATCCATACAAAATTTATTTTAACAGAATGAGTCGAGAGGCGTCCAAAAAAAATAATACCTTTTTAATACCTCCGTATCGGAAACTTGGATTAATTCTATTCTCTTGGCAAACATTCACCCTAACGAAACACGCAAGGCGAACCTTGCGTGAGTCACGCGTCACGCCACACGCTCCAATAAGAAGACTCTTCAGGTTGGTTTGCGAATCGCGCAGTCCCCGTTCAAGTCCATTTTGTAAAAATCGCAACAATTTGTCCTTTAACTTTTTTCAGCTGTCTCTCAGTGCCCTCCTCAGACTAGCCAATGTAGTTGTCAATAACGATTTTTATCGACAACTAAAAAACGCACTGTGCGAGACGAGCTGTCGGACTACTAAATGCTAAATTATAAGTTGTCGCAACTAAAAATTAGCGTTTTGTTGTCGATAAAAAAATGGTTTGTCGACAACTAAATTGTCTAGTCTGTGGGGGGTCCTCAGAGGAGGGAGATTTTGCCTGTGTTCGATCTAGTGAAATATTGGTAAAGGAGATGTTTTTTTAAGCTGGCTTTGAATTTTGTGTTGCACTGAAACCAATAGAGTTACGTGACGAGAGCTATGACACTACTCCTTGATTCTCTGATGCATGGCGATAACAATAGCTGAAGTTTTAGTAAGGTTGAGACGTCTGTGACTTTTTATGCCAACTGCTCGCAAAGATCGTTCAAAGGTCAGGTTTGGTTTCGTTGTTGAACCCGAAAACGAAGAATTATTATCCACAAATACCTTCATTTTCTGCGGTATGATTGTAATAAACTTGATCGGAGTTGGCCTATCCTAGTCCCCGACCGATTTCTTTGCACCTCATTTTCTGATGAAAAtataggcgaatcttggtttacagtttttccctcattaacatatgcttatcactatctgatggcgctaataaaaaaaacctgaatat

Protein

Uniprot

Uniprot term	Description
Q9Y2X3	Nucleolar protein 58 OS=Homo sapiens OX=9606 GN=NOP58 PE=1 SV=1
Q4R779	Nucleolar protein 58 OS=Macaca fascicularis OX=9541 GN=NOP58 PE=2 SV=1
Q6BIX6	Nucleolar protein 58 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=NOP58 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01798	Nop	snoRNA binding domain, fibrillarin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045056	Family	Nucleolar protein Nop56/Nop58	Interproscan
IPR036070	Homologous_superfamily	Nop domain superfamily	Interproscan
IPR012976	Domain	NOSIC	Interproscan
IPR002687	Domain	Nop domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10894	NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0030515	Molecular Function	snoRNA binding	Interproscan
GO:0031428	Cellular Component	box C/D methylation guide snoRNP complex	Interproscan
GO:0032040	Cellular Component	small-subunit processome	Interproscan