Detailed information of aacu_s0252.g23.t1 in Acropora acuminata

Genomic Location: sc0000252_pilon:405567...479835
NR annotation: XP_044174480.1, uncharacterized protein LOC114956221 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8JHW2Thrombospondin-3a OS=Danio rerio OX=7955 GN=thbs3a PE=2 SV=2
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
Q03350Thrombospondin-2 OS=Mus musculus OX=10090 GN=Thbs2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF12947EGF_3EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR024731DomainEGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

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