Gene detail

Detailed information of aacu_s0260.g8.t1 in Acropora acuminata

Genomic Location: sc0000260_pilon:130509...189145
NR annotation: XP_044183819.1, armadillo repeat-containing protein 8-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0260.g8.t1

GAGGTGACCGTACTCAGCGAATCGGACGAAAAAAGAAGGTTAAAGAATTCAAAAAAGTTAATCCATTCATCATGAAAATGCCAGTGTTTACGGAGCCGGACACAGATGAGATTTTTGTCAACAATCTTTCTTCACCGGATCAAGATGACAGACTTCAAGCTGTAACGAATATCAAAAACACCGTCATTGGCAACAAAGCCAAAAAGTTGTCATTTATAAGGCTCAACGTCATTCCAAGGATCATTGAACTCTTGTCACAAGATGACACTAGTGTGGATTTTGTGGTGGAATCGATTGTACTACTGGGGAGTTTGGCAAGAGGTTCTACAGACAGTGTTCAAGCTTTGTTAGAGGCCAGTTCATTGAATGTCTTCTTGAAAGGCATTTGTCATTCGGATCCAAGAGTGGTTGAAGCCTCTGTTCGTTCACTTAGGACTCTAAACTCTTCTCCACTCACCCCATCTGCTCCCATCTTTGATGATTCCCTCATTATTCCAAAGTTAGTTGAACTACTCTCAAGTTCATTCTCCAATGCTGAGTGCGCAGCATCTGTTCTCTCCAAATGCTGCCAGGGTCCAGAACATCAAGCACTCTTGTGTAACATGGGAGCAGTAAATGCTCTGATGCCACTGTTGGTGTGTGACCTTCCTAAAATACAACTACCAGCCTTACTGTGCTATGCTACAATGTCGTTTCAAAACGGAGCTGTATCACTGGCTATGAAATCAGCCTCACATCAAGGTCAGAATCTAATCCAAATCTTTACCAAGCTGCTCTCAAGAGATAGACCAGAAGAAATTCAGCTAGGAGCTGCTAAATGTCTCACAAACATGCACAGAGCCGGAGCTATTTCAGGGCAAGAAAATCGTCCGCTCTTAATCAAGATCCTCGCCACAGCTGTAAGAATGTGTAAATGGGACAAAAGTCTTACTGTCAGAGTGGAAGCAGCAGAAACTTTAGCATTCCTCATTGAAGAGGATACAGACCTTCAAAGGACCGCCGCCATCTCTGATCACTTGATAAAAACACTAACAGGTTTCTTGGTCAAGAATGGCTTGGATGATAGTTCCTACGCTCTTATGAGGGAGAGCGCCTTCAAAGCTTTGGCCTCTGTCGGAGCGAATGATGAAGATATCAGGAAAAAGATAATAGACATCGAGTGTACAATGGACCACGTGGTATCGGGGCTGGAAGACCCCAATACTAACGTCAAGTTAGCAGCGGTCAAGTGTCTCCACAGTCTTTCGCGTTCTGTACAACAATTGAGGACTAGTTTCCAGGAGACGGCAGTTTGGAAGCCGATTATGAAGCTTCTTCAAGATGCCTCTGACAATATGCTGACTGTGGCCTCGTCTGCCCTCTGCAATTTGCTGTTGGAGTTTTCTCCCAGTAAAGAGCCTATATTGGAGGCAGGCGCCGTCAATTTACTTTCAAATTTGACCAGGCGACAGGAGACAGCTCTTAGGCTCAATGGTGTATGGGCTCTAATGAATATGGCATATCAAGCAGATGACGTAACCAAAAACAAAATTCTTGAAGTGCTTGGACCAGACCAGTTGTTTAGCCTTCTGGATGATCCTGACACGCAAGTCACAATGAAAACACTTGGACTGATGAGGAATCTTTTATCAGGAAGAGAGGATATTGACCGAATCATGCTGATTCACGGTTCTCGTGTGATGGAAAGTGTCAAACCCATACTGGACGGCGAAACACGCACTGAAGACGTCAAAGAACAGGCGTTGTGCGTGATCGCTAACATCGCCAACGGTTCGTCAGCCAAGGAATTTGTGATGAGAGACGAAAGTCTCCTGAAAAGACTCATGCAGTACATGATGAACGACAGTGTAAAGCTACAAATGGCAGCTACATACTGCGTGTCCAACCTTGTATGGAGTACAGAAGATGGTGCAGTGGGGAGGCAACAGAAGCTCAGAGATCTTGGTGTACAGAAACTCTTGCAGTCTCTATTAACGACGTCTGACGTTAATTTGTTTGAAAGAGTGAAGACTGCTTTGCAACAGTTCACGTGATCCTTTCCTTTTTTCTCTGAGAAACACGTTAGTACTCTATTCTCGAGCCGACTTCCCGTGATTCATAGATCACTGCCTATCCATGGAAAGGTTAGGACCCAGACTTCGAGAGAGCGATCAATCAACGCGTGCATTTGTA

Protein

Uniprot

Uniprot term	Description
Q2KI54	Armadillo repeat-containing protein 8 OS=Bos taurus OX=9913 GN=ARMC8 PE=2 SV=1
Q05AL1	Armadillo repeat-containing protein 8 OS=Danio rerio OX=7955 GN=armc8 PE=2 SV=1
Q9DBR3	Armadillo repeat-containing protein 8 OS=Mus musculus OX=10090 GN=Armc8 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02985	HEAT	HEAT repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR038739	Family	Armadillo-type fold containing protein ARMC8/Vid28	Interproscan
IPR000225	Repeat	Armadillo	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR000357	Repeat	HEAT repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15651	ARMADILLO REPEAT-CONTAINING PROTEIN 8	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0034657	Cellular Component	GID complex	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23336	ARMC8; armadillo repeat-containing protein 8	-	Ubiquitin system	ko04121	deepkoala