Detailed information of aacu_s0268.g16.t1 in Acropora acuminata

Genomic Location: sc0000268_pilon:198976...215768
NR annotation: XP_029192561.2, laminin subunit alpha-3-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P55268Laminin subunit beta-2 OS=Homo sapiens OX=9606 GN=LAMB2 PE=1 SV=2
Q8K3K1Usherin OS=Rattus norvegicus OX=10116 GN=Ush2a PE=1 SV=2
Q90922Netrin-1 OS=Gallus gallus OX=9031 GN=NTN1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049DomainLaminin-type EGF domainInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR013015DomainLaminin IV type BInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000034DomainLaminin IVInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0008045Biological Processmotor neuron axon guidanceInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan
GO:0016358Biological Processdendrite developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05636LAMB1; laminin, beta 1-Toxoplasmosisko05145deepkoala

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