Detailed information of aacu_s0350.g4.t1 in Acropora acuminata

Genomic Location: sc0000350_pilon:15476...29678
NR annotation: XP_029188780.2, LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2B-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35439Glutamate receptor ionotropic, NMDA 1 OS=Rattus norvegicus OX=10116 GN=Grin1 PE=1 SV=1
P35438Glutamate receptor ionotropic, NMDA 1 OS=Mus musculus OX=10090 GN=Grin1 PE=1 SV=1
Q12879Glutamate receptor ionotropic, NMDA 2A OS=Homo sapiens OX=9606 GN=GRIN2A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF05270AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR007934DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR036195Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0046373Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556Molecular Functionalpha-L-arabinofuranosidase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan

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