Gene detail

Detailed information of aacu_s0361.g9.t1 in Acropora acuminata

Genomic Location: sc0000361_pilon:231964...251925
NR annotation: XP_044168481.1, uncharacterized protein LOC122952682 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aacu_s0361.g9.t1

ATGGCGGACCGCAAGTCGAGAAGCTTCTCATTCAAAGTTCCACCAGGAACAAGCCTTGCTCAAATCAGGGCATCAATTGAAAACGAAATCACAGAGGGTGCTATTAATGTTTTTCAACAAATTGGAGCATCGGAATATTTGGTGGAACTCACCGATGCTGCACAAGTACGAGAGCTTATTGAAAATGGTTTTGACGCCGGTACAAACCATATAAGATGTCATCCACCTCATGGCTATTATCTGAACGTCAGCATTTTGGGGTTGAAATCCTACATCGACGATGAGGAGGTTCTGGAAAAGCTATCTCAATATGGCGAAGTGAAAAGTTCAGTGATTCGACTGAAATATCGACTAGATCACGAATTGGCAGGATTGGAAAATGGTAACCGTTTAGTACGAATGGTTCTGACATCACCATCTATACCTTATTCTCTCCAAATAGGCAGAGAATGGTGTAGAATCATTCACAATAATCAGCAACAAATCTGCAGTAACTGCAATGAGCCGGGCCACTCGCGGAAAAATTGTCCTTCTATTGAATGCCGTGTGTGTGGAACTCTTGGTCATATCTCTTATCATTGTCCAACTAGAAATGCTCACCACACGGAAAATACGGATGAAGACTCCACCACGTCGAATGATAACACTGAAAACGTTGAAAATAGCGATAATCTAGAAAACCCGATGGAAGAAACTGAAGAGCAAGATGGCGAACAACCTATAATGGATCAAGAAGAAGAACGTGAACCGCAAACGGGAAATAACACGAAATGGCAAGTCGTAAGCGCTAAAAGACCACATCAAACGGACTCAGACTCTGAACCTTTGACTTTACCAAGAAAACAACGAATTAAGCCGACACCAAACTTGAATGCAGCTCGCTGTTTGAGGAAAAGTGCAGATGACACCACCAAATCAATGGCCGCATGTGATACAAACCTCACCTTCGGACCGTTTGACCTGGACTTAGATCCGACATCGGTTGGCACTCGATTCAGGAAATATCTCGAAAGATTCAAAGTATACGCTGTGGCGATGAATATAAAGGATGAAGCGAGAAAACGAGCACTATTCTTACAATGTGCTGGACCAAAAGTGCAGGATATTTTCGACACACTAGGGGATACTGCAGAAGATTTCGAAACCGCCGGAGAAAAACTTTTAGAGTATTTTGAGCCTAAGAGACACCGTCTTTTCAGCATCTACAAATTTTGGACGTTACTCCAGGAGGAAGAGGAGTCTTACGATGATTACACAACTCGTTTGAAGCAAGCAGCGGCTCCATGCGGATTTCCAGAGAATTGGCTTGAAGTCGAAATACAAATGCAGTTAATTGAAAAGGGAAAATCGAAGAGAGTCAGGCGGCGTTTGCTCAGCAAGCCTCATTCGCTTCAGGAGGTGTTAGATTATGCTAGAGCACAGAAAATGTCGGATAAACAAGCGAAGAGTCGAAATGGAGCAACAAAGTCGAGAAAATACTACCGAGGAAGAATTGAACAGGGTCTCATTCGGAAGGCAAAACAACTCGAATGGCATCAACAAAGAGTGTTATTTTTGTGTAGGCACATTTCCACTCGTTGGACGAAAAAGATATGCCAAGCATGGGGAAAGAAATGCATCACATGCGGGAAGATGAATCATTTTGTCAATTGCTGTTTGCGTAAAGGGAAAGTAAACCAGAGTATCGTAAAGACAGTTCATCACGAGATGGACTCGGATAGCAGTGACGCGGAATCCCTGTGTGAGATCGAGGAAGTTGGGGTTGTCGAAAGCAAGCTAAAACCCAGACCAGTAAGAAGCATTAAAATTGAAAACTGCGAAGTCGAAGTGCTGATTGACACAGGAGCGTCGGTAAATGTAATGGATGAATGCATCTTTCAGCAACTTTTTGCCAACAAGGTCAAATTGCAGAGGTCATCAAGTGTTCTACGCTCGTACCAAACGAACGAAAACCCGTCCAGGCCATTCACGGTGATGGGGAAATTTGATGCAGTCCTAGAGTCAAACATGAAAATGATCCCGGCAACGTTTCACCTCATTAAGGGGAACACTAACACGAAACCCTTGATAGGAGTTCAGAGTGCCGAAAGTCTTGACCTGGTTATAATTACGAATGTGGAATACGCTGATCTGTTCCAGGGGATCGGGAAAATGGAAGGAGTGCAGCACATTTTAAAGTTTGGATTTGGGTTGGATTTGTTCCTCTATTATGCTCGGAATATCGCTGCTGTGAACTCTCAGGCCTGA

Transcript

aacu_s0361.g9.t1

ATCGAGCTTTTAAATCGTGTGCTTTGTTTTGGTAACGTCTTGGAGGCATTATTGGAAGGTTTCTTTTCCTTGGTAAAGCTCTATATCTGGTTTTTTCTCACAGAACTTGTAGCGACTACGCGGTCACGCCAATATGGCGGACCGCAAGTCGAGAAGCTTCTCATTCAAAGTTCCACCAGGAACAAGCCTTGCTCAAATCAGGGCATCAATTGAAAACGAAATCACAGAGGGTGCTATTAATGTTTTTCAACAAATTGGAGCATCGGAATATTTGGTGGAACTCACCGATGCTGCACAAGTACGAGAGCTTATTGAAAATGGTTTTGACGCCGGTACAAACCATATAAGATGTCATCCACCTCATGGCTATTATCTGAACGTCAGCATTTTGGGGTTGAAATCCTACATCGACGATGAGGAGGTTCTGGAAAAGCTATCTCAATATGGCGAAGTGAAAAGTTCAGTGATTCGACTGAAATATCGACTAGATCACGAATTGGCAGGATTGGAAAATGGTAACCGTTTAGTACGAATGGTTCTGACATCACCATCTATACCTTATTCTCTCCAAATAGGCAGAGAATGGTGTAGAATCATTCACAATAATCAGCAACAAATCTGCAGTAACTGCAATGAGCCGGGCCACTCGCGGAAAAATTGTCCTTCTATTGAATGCCGTGTGTGTGGAACTCTTGGTCATATCTCTTATCATTGTCCAACTAGAAATGCTCACCACACGGAAAATACGGATGAAGACTCCACCACGTCGAATGATAACACTGAAAACGTTGAAAATAGCGATAATCTAGAAAACCCGATGGAAGAAACTGAAGAGCAAGATGGCGAACAACCTATAATGGATCAAGAAGAAGAACGTGAACCGCAAACGGGAAATAACACGAAATGGCAAGTCGTAAGCGCTAAAAGACCACATCAAACGGACTCAGACTCTGAACCTTTGACTTTACCAAGAAAACAACGAATTAAGCCGACACCAAACTTGAATGCAGCTCGCTGTTTGAGGAAAAGTGCAGATGACACCACCAAATCAATGGCCGCATGTGATACAAACCTCACCTTCGGACCGTTTGACCTGGACTTAGATCCGACATCGGTTGGCACTCGATTCAGGAAATATCTCGAAAGATTCAAAGTATACGCTGTGGCGATGAATATAAAGGATGAAGCGAGAAAACGAGCACTATTCTTACAATGTGCTGGACCAAAAGTGCAGGATATTTTCGACACACTAGGGGATACTGCAGAAGATTTCGAAACCGCCGGAGAAAAACTTTTAGAGTATTTTGAGCCTAAGAGACACCGTCTTTTCAGCATCTACAAATTTTGGACGTTACTCCAGGAGGAAGAGGAGTCTTACGATGATTACACAACTCGTTTGAAGCAAGCAGCGGCTCCATGCGGATTTCCAGAGAATTGGCTTGAAGTCGAAATACAAATGCAGTTAATTGAAAAGGGAAAATCGAAGAGAGTCAGGCGGCGTTTGCTCAGCAAGCCTCATTCGCTTCAGGAGGTGTTAGATTATGCTAGAGCACAGAAAATGTCGGATAAACAAGCGAAGAGTCGAAATGGAGCAACAAAGTCGAGAAAATACTACCGAGGAAGAATTGAACAGGGTCTCATTCGGAAGGCAAAACAACTCGAATGGCATCAACAAAGAGTGTTATTTTTGTGTAGGCACATTTCCACTCGTTGGACGAAAAAGATATGCCAAGCATGGGGAAAGAAATGCATCACATGCGGGAAGATGAATCATTTTGTCAATTGCTGTTTGCGTAAAGGGAAAGTAAACCAGAGTATCGTAAAGACAGTTCATCACGAGATGGACTCGGATAGCAGTGACGCGGAATCCCTGTGTGAGATCGAGGAAGTTGGGGTTGTCGAAAGCAAGCTAAAACCCAGACCAGTAAGAAGCATTAAAATTGAAAACTGCGAAGTCGAAGTGCTGATTGACACAGGAGCGTCGGTAAATGTAATGGATGAATGCATCTTTCAGCAACTTTTTGCCAACAAGGTCAAATTGCAGAGGTCATCAAGTGTTCTACGCTCGTACCAAACGAACGAAAACCCGTCCAGGCCATTCACGGTGATGGGGAAATTTGATGCAGTCCTAGAGTCAAACATGAAAATGATCCCGGCAACGTTTCACCTCATTAAGGGGAACACTAACACGAAACCCTTGATAGGAGTTCAGAGTGCCGAAAGTCTTGACCTGGTTATAATTACGAATGTGGAATACGCTGATCTGTTCCAGGGGATCGGGAAAATGGAAGGAGTGCAGCACATTTTAAAGTTTGGATTTGGGTTGGATTTGTTCCTCTATTATGCTCGGAATATCGCTGCTGTGAACTCTCAGGCCTGACAAGATAATTGCCATTACTGTTTCCTGCATGCTTAatgaagttttcatgttttt

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan