Gene detail

Detailed information of aacu_s0375.g9.t1 in Acropora acuminata

Genomic Location: sc0000375_pilon:207929...212945
NR annotation: XP_044172451.1, uncharacterized protein LOC114973113, partial [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aacu_s0375.g9.t1

ATGAATGCGACTCAAAAAGTTACGATTGAAGATACATTACAGGGTCTGTCAAAACTGCGTCCTTCGTTTCCATACTTTGTTAATCGAAAAACTGACGAACTTTCCCATATTGTGAAGTGTCTTGATCCAGAAAATGAGCAGTGTCAGGGCGTGTTCATAGATGGAGCTCCAGGGATTGGCAAGACAATTCTTGCAACCGAGGCTGCTAACAAGTTACGTAGAGATAACAGACATGTCCTTGTTGCGTACATCGACTGCATGGAGATGAACTCTTTCGAATCCTTCGCAGGAGCAATCATTGGGCAAATTTCCCGTTCGCCCTCTGTAGACGATCCAGCAGGTGAAATAAAGAAGCGATTAAATGCAAGAACAGAGTATTTTTACATCTTGTTTCTGGATAACTTTGAATGTTTCCTTAAAGAGAATGACAAACAGCAGGCGGAACAACCTTCGACAGCAGGAGCCCCATCTCGTGATTGTAGAGAAAGGGTCAAAAGGTTTATCGGTGAAATTGCTAGACGCCCGACAAACATCAAGTTTCTTGTTACTTCGCAGGAAACAGCTAGTTTTCCAACGCTAGCGATGGAAACGATAAAATTGCATCCGTTTGATAAAGACGAATTATCTAAGCTCTTGGGAAAAGTAAGATGTGCCGACAAAATGTCAGATGAAGAATGCGAAGAACTTTGCAAGAGTTGCAGTGGTATTCCTCTGGTACTCCACACTTTGATCTCGTTGCAAAAGGATCTGAAATGTTTTGTAAAATTACCTCCGGAAGAGAGAACAACTTTCTTGCGGAAGATGAAAACAGTGCCTGAAGAAAAAAAAATAGGCGTTTGCCTCGATGTTTGCTTCCAAAGACTGACACCCCAAGTACAACTGACCTTACTACGTTTGTGTCTTTACAAGGGATTGTTTACTCCAGATAAAGCAGCAAAAATCTTTTGCTCTCCTGAAATAAGCCAAGATAATCTCATTTCTATTGTCTTGGAATTGGGACGGTGCAATCTCTTGCACCTACAAAAATCCCAAGATACAAACAAATATACAGTTCTCACAGTCATTCGAGAACATTTCAAATTCAAGGCAAAGGAAGATTATCGCGAAGAGATCCAACATGCCCGTAGTCTGCTGATCGATTACCTCATTTCTTTCTTGAAAGATACTTTCAAGGTGTTCTTGGGCAAAAATTCAGTGAAAGAGGCTATCGAGGAGTTTTTAAGGGAAAACGAGAACGTGATGCAGCTGGTTGAATGGATCAACAAGGGTGAAATGGATGAAGAACGAGTCAAGAAATGTATCGACGTCTTTAATGTAGCAGGAGAGATGCTGGCAAAGATAATGGGAAAATTCAATTATAGAACTGTTTACGAATCTTTGGCTAAGAAGTGCAGAGAAATGGAAGACCAGCAGAGACTGGCTGAATGTCTGACTTCCCTTGGGATCAAAGAAATCTTCAACTGCATACGTGTAACCGGTCTGAGCGAGGAAGCTATTAAGGAAGCTCGACGCTACTTGGATGAAGCTGACGAGATCCAGACTAACCTCCAAGTCAACAAGGGTAACAGCCGCGCCCAGTGCCTCGCTAAGCTTGGTCGTTGTCTAGTAAAAGCTGATAACAACGAGCGAGGGAAGGCCATGATTGAGGCTGCAATACTTATCAGAAAGGCCACAATCGACACACCCATTGATCATGAAAAAGAAGGTGGCGAGAATGTCTGTTATGTCATGCTGGGTGCAACATATAATGACAAGGCAGTTGCTCTTTCTTTTGAAAACCGTCATCGAGAGGCTGTGAACATCAGAGAAAGTGAAGTGATGCCGATTTACAGAGAAAGATTGGGTGACCATCCTTTCACTGCCACCATCCTCAACAATTTGTCCAATAATCATCGCGACCTGGGAGAATTTGAGGCCGCTGAAGAGTACGCTGAACGAGCCCGAGAAATTCGTCTCGAATTATTGGCGGACCACAGGGACACCGCCAAATCTTTGTTTGATCTTGGAGTGGCGCGAAAAGCGAACGGAAAGTTCAGAGAAGCAAAGGATTCGCTAGAACAATGTAAGACTATGCAGGAGAAAGTGGTGAATGATAGCACCTTCGAGAAAAATACGGAAGAAGAACTAAGAGATGTTAACAGACTACTTGAAATGCAGCAGTCAGAGGGCCAAGATCAGTGA

Transcript

aacu_s0375.g9.t1

ATTAAAGTTCACGAAAGTGATCAGTTGAACAATCCGACAATCAGTTTAACGCTATCCTAGTTAAAATGAATGCGACTCAAAAAGTTACGATTGAAGATACATTACAGGGTCTGTCAAAACTGCGTCCTTCGTTTCCATACTTTGTTAATCGAAAAACTGACGAACTTTCCCATATTGTGAAGTGTCTTGATCCAGAAAATGAGCAGTGTCAGGGCGTGTTCATAGATGGAGCTCCAGGGATTGGCAAGACAATTCTTGCAACCGAGGCTGCTAACAAGTTACGTAGAGATAACAGACATGTCCTTGTTGCGTACATCGACTGCATGGAGATGAACTCTTTCGAATCCTTCGCAGGAGCAATCATTGGGCAAATTTCCCGTTCGCCCTCTGTAGACGATCCAGCAGGTGAAATAAAGAAGCGATTAAATGCAAGAACAGAGTATTTTTACATCTTGTTTCTGGATAACTTTGAATGTTTCCTTAAAGAGAATGACAAACAGCAGGCGGAACAACCTTCGACAGCAGGAGCCCCATCTCGTGATTGTAGAGAAAGGGTCAAAAGGTTTATCGGTGAAATTGCTAGACGCCCGACAAACATCAAGTTTCTTGTTACTTCGCAGGAAACAGCTAGTTTTCCAACGCTAGCGATGGAAACGATAAAATTGCATCCGTTTGATAAAGACGAATTATCTAAGCTCTTGGGAAAAGTAAGATGTGCCGACAAAATGTCAGATGAAGAATGCGAAGAACTTTGCAAGAGTTGCAGTGGTATTCCTCTGGTACTCCACACTTTGATCTCGTTGCAAAAGGATCTGAAATGTTTTGTAAAATTACCTCCGGAAGAGAGAACAACTTTCTTGCGGAAGATGAAAACAGTGCCTGAAGAAAAAAAAATAGGCGTTTGCCTCGATGTTTGCTTCCAAAGACTGACACCCCAAGTACAACTGACCTTACTACGTTTGTGTCTTTACAAGGGATTGTTTACTCCAGATAAAGCAGCAAAAATCTTTTGCTCTCCTGAAATAAGCCAAGATAATCTCATTTCTATTGTCTTGGAATTGGGACGGTGCAATCTCTTGCACCTACAAAAATCCCAAGATACAAACAAATATACAGTTCTCACAGTCATTCGAGAACATTTCAAATTCAAGGCAAAGGAAGATTATCGCGAAGAGATCCAACATGCCCGTAGTCTGCTGATCGATTACCTCATTTCTTTCTTGAAAGATACTTTCAAGGTGTTCTTGGGCAAAAATTCAGTGAAAGAGGCTATCGAGGAGTTTTTAAGGGAAAACGAGAACGTGATGCAGCTGGTTGAATGGATCAACAAGGGTGAAATGGATGAAGAACGAGTCAAGAAATGTATCGACGTCTTTAATGTAGCAGGAGAGATGCTGGCAAAGATAATGGGAAAATTCAATTATAGAACTGTTTACGAATCTTTGGCTAAGAAGTGCAGAGAAATGGAAGACCAGCAGAGACTGGCTGAATGTCTGACTTCCCTTGGGATCAAAGAAATCTTCAACTGCATACGTGTAACCGGTCTGAGCGAGGAAGCTATTAAGGAAGCTCGACGCTACTTGGATGAAGCTGACGAGATCCAGACTAACCTCCAAGTCAACAAGGGTAACAGCCGCGCCCAGTGCCTCGCTAAGCTTGGTCGTTGTCTAGTAAAAGCTGATAACAACGAGCGAGGGAAGGCCATGATTGAGGCTGCAATACTTATCAGAAAGGCCACAATCGACACACCCATTGATCATGAAAAAGAAGGTGGCGAGAATGTCTGTTATGTCATGCTGGGTGCAACATATAATGACAAGGCAGTTGCTCTTTCTTTTGAAAACCGTCATCGAGAGGCTGTGAACATCAGAGAAAGTGAAGTGATGCCGATTTACAGAGAAAGATTGGGTGACCATCCTTTCACTGCCACCATCCTCAACAATTTGTCCAATAATCATCGCGACCTGGGAGAATTTGAGGCCGCTGAAGAGTACGCTGAACGAGCCCGAGAAATTCGTCTCGAATTATTGGCGGACCACAGGGACACCGCCAAATCTTTGTTTGATCTTGGAGTGGCGCGAAAAGCGAACGGAAAGTTCAGAGAAGCAAAGGATTCGCTAGAACAATGTAAGACTATGCAGGAGAAAGTGGTGAATGATAGCACCTTCGAGAAAAATACGGAAGAAGAACTAAGAGATGTTAACAGACTACTTGAAATGCAGCAGTCAGAGGGCCAAGATCAGTGAACCATGATTTTCGCAGGATAGCTAATTCTAAAAATAGCATGAAAATAGTAGCTGTACAAATAGTACTAATTGTATTTTAAATGTCTATAAGCTTTTACTCGGCAACTATGCGTTCTAGTCTTGGCTAACATCATAAAGTTCTGGTTAAAAAGCCACCGATTCGTGAGAATGATACACAATAATATTAATGTATTTAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan