Gene detail

Detailed information of aacu_s0406.g5.t2 in Acropora acuminata

Genomic Location: sc0000406_pilon:62249...70945
NR annotation: XP_044163697.1, LIM/homeobox protein Lhx9-like isoform X1 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
A0JNI8	LIM/homeobox protein Lhx9 OS=Bos taurus OX=9913 GN=LHX9 PE=2 SV=2
Q80W90	LIM/homeobox protein Lhx9 OS=Rattus norvegicus OX=10116 GN=Lhx9 PE=2 SV=1
Q9NQ69	LIM/homeobox protein Lhx9 OS=Homo sapiens OX=9606 GN=LHX9 PE=1 SV=3

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412	LIM	LIM domain	Domain	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050453	Family	LIM/homeobox transcription factors	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24208	LIM/HOMEOBOX PROTEIN LHX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030182	Biological Process	neuron differentiation	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan