Detailed information of aacu_s0417.g4.t1 in Acropora acuminata

Genomic Location: sc0000417_pilon:47416...62519
NR annotation: XP_015780820.1, PREDICTED: homeobox protein Hox-A5-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P52949Homeobox protein Hox-A5 (Fragment) OS=Rattus norvegicus OX=10116 GN=Hoxa5 PE=2 SV=1
P49925Homeobox protein Hox-C6 OS=Ovis aries OX=9940 GN=HOXC6 PE=2 SV=1
P14837Pancreas/duodenum homeobox protein 1 OS=Xenopus laevis OX=8355 GN=pdx1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR000047Conserved_siteHelix-turn-helix motifInterproscan
IPR001827Conserved_siteHomeobox protein, antennapedia type, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45664PROTEIN ZERKNUELLT 1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan

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