Gene detail

Detailed information of aacu_s0583.g2.t1 in Acropora acuminata

Genomic Location: sc0000583_pilon:38522...59775
NR annotation: XP_044168135.1, uncharacterized protein LOC122952168 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aacu_s0583.g2.t1

ATGCCAAATAACAGCAAGAGTACATGGATTTATAACAGCTGCAAGGAAAATCCCAATAAAGCAAATGATGTGAACATTTCCACAGTTCAGTCAGGTGAAAACATTACTTCTTCTTTAACTTCTTTAATTCCATCTACCACTTGTACTTCTTCAATTCCACAACATCCTTGTGATGATGTCAATCATAGTGTTGATTATTTATCTATCAGAGATAGTGATGATGACTATTCTGATGCTCAATGTGACAGTAATGATGATTTACAAATAACAAAAGTTTGTCATGGACACATTGATAAGACAGCTTCTCTGGGGAATTTAACTCAGGCAGAATATGCTATCATTGAATCTCCAAATGGATGGTTGGACTGCTCTGTCATACAAGAAGCTCACATTTTACTGAAACAAGTGAATCCAGTGATCAAGGGATTTCGAAGGACTACCCTGGGACCAGCAagaaactttgatgtagtaacaagtgaatttgtgcaaattctgcacacagAGAAAAACATGACCAGTATCGCTCCAACGACACTAATCGAAGAAAAAGATAGAGATTTACGAGAAGGCTTAGAGGTAAACGTGAACTGGCAGGGAAGAAAGGTTCGAGCTCAGATACTCGCTTTGGATGATGACGAGCAAAAGTTAAGTGCAAAGGATATTGAGTGGTCAGGTCTCAATATACCTATCACTGGAGGACACACGAAAGGATTAGGAAACCATGAAGAGCGAAAATCTGTGAGAGTTGGCGCGGAGGGCTCGAAAAAGTCGAAGAAAGttgtggccccgaatggcatgattgctaatttgtttggtcctgtagaagggaaaagacatgactcagccatgttcaggatGATCTTGGATCATTTGGATGAAGATGATTTTGAGAAGGAAATCGACGAGACAAGTGAACTAAAAATGAGGATCCAGGAGAGAATTATAAACATCGAGCTAGCTATAAAAACTGACAGCAGCGAAAGTGAAGACAACGATGATATTGGCTCTGCTCGCTCGTCTTCAAGAGCGTCTTCGTCGAAGAAAACAAAGCGGTTGACACAAACGGTAAAACTTCCCAAATTGGTTATAAAGAAATTCGGGGGAAATCACGCGGAATATCAAGCGTTCTGGGATAGTTTCGACGCTGCAATTCACAGCAACGAAACGTTGAGTGACATCGAGAAGCTGAATTATCTTCATTCTTTTTTGGAAGGCCCAGCCGTGGCAACAATTGCTGGACTCGCGCTAACGAAGGATAATTACAAAGTTGCGGTTGACCTTTTGCGTGAGAGATACGGAAACAAGCAAGTCATCATAAGTTCTCACATGGAATCCTTGTTGAAGCTTCCGCGAGTTAACTTCGTATCGGATATCAAGCGTGTACGCATGGTTTACGATCAGATCGAAATTAAGATCCGTAGTTTGCAGGCTCTCGGGATTAAAGCTGAAAGTTATGGAAGTCTGCTGATCCCAGTTGTAATGGAAAAGATTCCCGAAGAATTTCGGCTCGTTATTAGTCGCAGAATGAAATCGGATACCTGGGATGTCAACGAGTTGATCGAAGCATTTAAAGAAGAATTGGAGGCACGTGAGAAAACTAGATTCGTAGGAGGCTCCGGAAATGTCGTGGAAAAGCCTTGGTTGAAACCCAAGATACCTCGTGACCCGATTACTGCAGCAGCGTTGTTTCTGCCAGAGCGAGGGCAAGCAAACTGTTATTTTTGCAATCACCCGGGTCATAGGTCGTTCAACTGCACTTCAGTCACTCATCCAGAGAAGAGGAAAGCGATTTTAAAGAAAAAGGGACGGTGTTTTGTCTGTCTGAGAAGAGGTCACGTTTCAAATTGTTGCCCGTCGGAATACACATGCAAGAAATGCTTTGGAAGACATCATATTAGTGTTTGTTCCGGAGGTTTTCATTTGCCCAAGAGGGGACTAAATCGAGGGAGCTTTATTGCTGGACGCAGCGTTCATAATCAGAGAATTGAAAGGCTCTGGGCGGAAGTGAACAGGGTTGTTTCCTCATTCTATATTGATCTGTTCAATTTCATGGAATACACTGGTATCCTTGATGCACACGATGAACGTGATTTGTTTGCGCTTCACTACTTTTACAAGCCTGCTATTCAGGCATCTTTGGACGAGTTCATCTCTCAATGGAACTACCATGGTCTGCGAACCATGAGAAGTATGTCTCCCCTGGCCCTGTGGTACTCTGAAATGGTGGCTAGCAGTGTGGATGATGTTGACGTGGGTGATATTTCTTTGTATGGTGTGGATCCCGAAGGCCCAGTACCAGACATTGAAACAGATGACATGGTTACCGTGCCTGAGAGCACCGTTCAAGTGACTGACAATCACGCAGATGAGATCAGAAGTCGTGTCCCAGATCCTCTGGTCGATGATGGAAACCACGGAATTGCGCATTATCTCGCCATAGCTAATTATTTGAAAATGCGCTATCAATCATGA

Transcript

aacu_s0583.g2.t1

ATGTAACAAAGCCCTCAGCCTGAATAGTGTCTGCATTTGTAATTCAAAGCCAAGACCAGGTGATAGACTTATTGAATGCCACAGTGAAGACTGTTTAAATGGAAAATTTTTTCATTTAGACTGCCTAAAATACAAAAGGATGCCAAATAACAGCAAGAGTACATGGATTTATAACAGCTGCAAGGAAAATCCCAATAAAGCAAATGATGTGAACATTTCCACAGTTCAGTCAGGTGAAAACATTACTTCTTCTTTAACTTCTTTAATTCCATCTACCACTTGTACTTCTTCAATTCCACAACATCCTTGTGATGATGTCAATCATAGTGTTGATTATTTATCTATCAGAGATAGTGATGATGACTATTCTGATGCTCAATGTGACAGTAATGATGATTTACAAATAACAAAAGTTTGTCATGGACACATTGATAAGACAGCTTCTCTGGGGAATTTAACTCAGGCAGAATATGCTATCATTGAATCTCCAAATGGATGGTTGGACTGCTCTGTCATACAAGAAGCTCACATTTTACTGAAACAAGTGAATCCAGTGATCAAGGGATTTCGAAGGACTACCCTGGGACCAGCAagaaactttgatgtagtaacaagtgaatttgtgcaaattctgcacacagAGAAAAACATGACCAGTATCGCTCCAACGACACTAATCGAAGAAAAAGATAGAGATTTACGAGAAGGCTTAGAGGTAAACGTGAACTGGCAGGGAAGAAAGGTTCGAGCTCAGATACTCGCTTTGGATGATGACGAGCAAAAGTTAAGTGCAAAGGATATTGAGTGGTCAGGTCTCAATATACCTATCACTGGAGGACACACGAAAGGATTAGGAAACCATGAAGAGCGAAAATCTGTGAGAGTTGGCGCGGAGGGCTCGAAAAAGTCGAAGAAAGttgtggccccgaatggcatgattgctaatttgtttggtcctgtagaagggaaaagacatgactcagccatgttcaggatGATCTTGGATCATTTGGATGAAGATGATTTTGAGAAGGAAATCGACGAGACAAGTGAACTAAAAATGAGGATCCAGGAGAGAATTATAAACATCGAGCTAGCTATAAAAACTGACAGCAGCGAAAGTGAAGACAACGATGATATTGGCTCTGCTCGCTCGTCTTCAAGAGCGTCTTCGTCGAAGAAAACAAAGCGGTTGACACAAACGGTAAAACTTCCCAAATTGGTTATAAAGAAATTCGGGGGAAATCACGCGGAATATCAAGCGTTCTGGGATAGTTTCGACGCTGCAATTCACAGCAACGAAACGTTGAGTGACATCGAGAAGCTGAATTATCTTCATTCTTTTTTGGAAGGCCCAGCCGTGGCAACAATTGCTGGACTCGCGCTAACGAAGGATAATTACAAAGTTGCGGTTGACCTTTTGCGTGAGAGATACGGAAACAAGCAAGTCATCATAAGTTCTCACATGGAATCCTTGTTGAAGCTTCCGCGAGTTAACTTCGTATCGGATATCAAGCGTGTACGCATGGTTTACGATCAGATCGAAATTAAGATCCGTAGTTTGCAGGCTCTCGGGATTAAAGCTGAAAGTTATGGAAGTCTGCTGATCCCAGTTGTAATGGAAAAGATTCCCGAAGAATTTCGGCTCGTTATTAGTCGCAGAATGAAATCGGATACCTGGGATGTCAACGAGTTGATCGAAGCATTTAAAGAAGAATTGGAGGCACGTGAGAAAACTAGATTCGTAGGAGGCTCCGGAAATGTCGTGGAAAAGCCTTGGTTGAAACCCAAGATACCTCGTGACCCGATTACTGCAGCAGCGTTGTTTCTGCCAGAGCGAGGGCAAGCAAACTGTTATTTTTGCAATCACCCGGGTCATAGGTCGTTCAACTGCACTTCAGTCACTCATCCAGAGAAGAGGAAAGCGATTTTAAAGAAAAAGGGACGGTGTTTTGTCTGTCTGAGAAGAGGTCACGTTTCAAATTGTTGCCCGTCGGAATACACATGCAAGAAATGCTTTGGAAGACATCATATTAGTGTTTGTTCCGGAGGTTTTCATTTGCCCAAGAGGGGACTAAATCGAGGGAGCTTTATTGCTGGACGCAGCGTTCATAATCAGAGAATTGAAAGGCTCTGGGCGGAAGTGAACAGGGTTGTTTCCTCATTCTATATTGATCTGTTCAATTTCATGGAATACACTGGTATCCTTGATGCACACGATGAACGTGATTTGTTTGCGCTTCACTACTTTTACAAGCCTGCTATTCAGGCATCTTTGGACGAGTTCATCTCTCAATGGAACTACCATGGTCTGCGAACCATGAGAAGTATGTCTCCCCTGGCCCTGTGGTACTCTGAAATGGTGGCTAGCAGTGTGGATGATGTTGACGTGGGTGATATTTCTTTGTATGGTGTGGATCCCGAAGGCCCAGTACCAGACATTGAAACAGATGACATGGTTACCGTGCCTGAGAGCACCGTTCAAGTGACTGACAATCACGCAGATGAGATCAGAAGTCGTGTCCCAGATCCTCTGGTCGATGATGGAAACCACGGAATTGCGCATTATCTCGCCATAGCTAATTATTTGAAAATGCGCTATCAATCATGATATTCATGAAAATTTATCATACTGTTTGCAGTCACTGGCAGCTTCTGACTGTAGGTGGCAAATATTAATATTGTAATAAGACTATAATTATTGAAAAAGCACTCCCAATAATGCTTGTTACTAATA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46791	EXPRESSED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan