Gene detail

Detailed information of aacu_s0678.g1.t1 in Acropora acuminata

Genomic Location: sc0000678_pilon:21239...41265
NR annotation: XP_015777580.1, PREDICTED: DELTA-alicitoxin-Pse2a-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aacu_s0678.g1.t1

TCAAGCACACGCTCCCGCTATTTTCGAATTCTTTGAAGCTGTGAATTCAACGGCTCGCAATACTCCGTGTGTTTTATTCTCATTTTAGACTTAGTCTACTGCAAAGAAACATAGATCTGTTGATATAGCTGCAAGGGATTTCTTGGAACAAAATGGCCTTGCCGATCTTATCCAACTGGTTGTCGAAGAAAATAAGCACGAGAAGAGAACCAAAAGCAGGGAATACATGTTCCCCCCGATGAAAAGGCAAAAATATGAAAAAATTATGATTCCAAAGCCATATGCAATTATAATACTGCATTGTTTTTTTTTCTTTGAAAGCCAGGAAATTGGATGATATCAAACTGATAAACATTAAGAAAGTGTTAACAAGCTTGGGGGTACCTCTACCCAAAGGACAACATTTTACTTAGGAAAATTATGCTATTTTATTGGGGAAGGAATTTTTTGATAGGGAGAATATGAGAAGGATAGACGAATGGAAAGTGGTCACCAAGAGCAGTCTTGTCTTGAATTGATTGCTGAACTGAAACTGGCTCAAGATGGAGGTTTTAAAATACATGTAGCTTTCAAATGTACATGTACACTGATACAAAAGTCTTGACAGTTTTTTTTTTTACAACCAACACTTTTTATGTTGAAGCACAATGACATACAATGTAATAATGTGAATAAAGTACAGCTTCCATCTGAGCAAGATTCCTTTTTCGTTTAGACTAAGGTCGAAATGACTTCAAGCTTAATGATGTGAAATTTCTGCCCAGAAATTAGCCGAAAACCATCAAACAAAAATTAGACGCTGGCAGTCTACTGCAACTAAGGAAACGCTACAGAAAAACCAACAGCTATGATTATGTTATTGGTGCTGTTCGTCTGCCTGGAAGCGTCATTCACCGAAGCAAAACGGACGAGTACACCAGGACCGGACGGTTCGACGGATGAACTTGGAAAGGGAGTCGATATTCGAAAAATCAACTTATTGGGTGACTTCCAGGAAGACCAGGCGAGCATATTCGCCAGTATCCCTTCAAAGTGCTTTTCAAAGGTAGATGAGCCTGCCTTAGGAAGTTACTATGACTACTACGAAAGCACCAAAGACTTCTACTCGAATCTGGCTGTCTCAACAGGATTGGGCACATCGCTGGAGTCTACATACACGCTGGGCTTTACGCTCACTAGCATCTCATCGTTATCACACTCGTCATCGTCTCAAGTAAGTGGTATATCCTTAAACGTGCGCAGCTACAAAGACAAGGTTCTGGTGTCAAAGGACTGTTTGGATGACGATTCAATCACTACCTTAAACAAGGGTGTTCTCAAGGAGTTAGAATCCTTGCCACTGACAATTAAGAGTCCCTGGTATGCAAACTCTTGGAAGCCATACGATGTATTCATCAATACATTTGGCTCACATGTGATAACGTCCGTTATTCGTGGATCAATGATCAAACAGACAGCATTTGCAAGCAGTTCTAAAGGTTACAGTGAAAGGGAATTCCAGGTAAAAAGCTGTGTTTCACTAGTTGGCCCCACAGAAGGAGGGAAGGCAAGTGTTGACGCGTGTGCAAATGTCACCTCAACTGAAAGAAACAATGTAGCCAACATAACCACCAAGGATAAAGTGATCATCAAAGGAGGAAAAAAGAAAACCCAAAGTGCGTTGTATAAGAACAGGACCGCTAAACTCATTGAACAACTGTTAAATGAGGCTGACGATTTTCCGGGTTCTGTCCATCACACCTTCAGGGCGATTTGGGAGGTCTTACAAAGCCGTTTTGCCTCCGGAACAAAAAACTACATCAGAGCAGTAAACCTTCAGTACTACTACCTTGGTTTCCTGAATTATGGCTGCAGATATCAAGAAAGTGGAGGCGTGGCACTCCAGAAATTCGACAAAACTCCCAGCCTCTCGCCATTGCGATCGAAGTCTCCGGAATACGAGTGTACTCTGGCCGCACAGGGTTGCCATAGCGACGACGATTGCCACTACAAGCCAATATGGTGCTCCTGTCGTGGCTCATCCTGCGTTCACTACGTATCAAAAAGCCTTGAAAATGGGGCTAAGAAAGAGGAGGCTATCGCAAACGATAATTTTGATTGGGGATGGCACGGCTGTGTCTGGACGAAACCGCCCGGGTTTTCCTGTTATTGCGACAACAATAATCGCAACAAGCGGAAATCAGTGTGGAGGATTAAACTCAGGGATCGTCCACACAAAGATGCTGGTAATGACCAACATGGCAGCAGTTCAGGTCAATATCAATATCCCTTACCCGATACATTTTCACATGAGGAGAAAGATGAATAGAAGACGGAGACGAAGAAATAAGCGCTGAGGCCAATTACCGGGAGAAATGCGTTATAAATTTAAAACAAGCCA

Protein

Uniprot

Uniprot term	Description
P58912	DELTA-alicitoxin-Pse2b OS=Phyllodiscus semoni OX=163701 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01823	MACPF	MAC/Perforin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020864	Domain	Membrane attack complex component/perforin (MACPF) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45742	COMPLEMENT COMPONENT C6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07818	PRF1; perforin 1	-	Type I diabetes mellitus	ko04940	deepkoala