Detailed information of aacu_s0871.g2.t1 in Acropora acuminata

Genomic Location: sc0000871_pilon:2220...7765
NR annotation: PFX13249.1, Retrovirus-related Pol polyprotein from transposon 17.6 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P03360Gag-Pol polyprotein (Fragment) OS=Avian reticuloendotheliosis virus OX=11636 GN=pol PE=1 SV=2
P10272Gag-Pol polyprotein OS=Baboon endogenous virus (strain M7) OX=11764 GN=pol PE=3 SV=2
P31795Pol polyprotein (Fragment) OS=Radiation murine leukemia virus (strain Kaplan) OX=31689 GN=pol PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR052160FamilyGypsy Retrotransposon Integrase-likeInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47266ENDONUCLEASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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