Gene detail

Detailed information of aacu_s2031.g1.t1 in Acropora acuminata

Genomic Location: sc0002031_pilon:1...3312
NR annotation: XP_029190474.2, A disintegrin and metalloproteinase with thrombospondin motifs 16-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O76840	Papilin OS=Caenorhabditis elegans OX=6239 GN=mig-6 PE=1 SV=1
Q4FZU4	ADAMTS-like protein 4 OS=Rattus norvegicus OX=10116 GN=Adamtsl4 PE=2 SV=1
Q6UY14	ADAMTS-like protein 4 OS=Homo sapiens OX=9606 GN=ADAMTSL4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19030	TSP1_ADAMTS	Thrombospondin type 1 domain	Domain	Interproscan
PF05986	ADAMTS_spacer1	ADAM-TS Spacer 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan
IPR010294	Domain	ADAMTS/ADAMTS-like, Spacer 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan