Gene detail

Detailed information of aacu_s3269.g1.t1 in Acropora acuminata

Genomic Location: sc0003269_pilon:1...1082
NR annotation: XP_015775940.1, PREDICTED: nuclear pore complex protein Nup153-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P49791	Nuclear pore complex protein Nup153 OS=Rattus norvegicus OX=10116 GN=Nup153 PE=1 SV=1
E9Q3G8	Nuclear pore complex protein Nup153 OS=Mus musculus OX=10090 GN=Nup153 PE=1 SV=1
Q640Z6	Nuclear pore complex protein Nup153 OS=Xenopus laevis OX=8355 GN=nup153 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|ZnF\|NZF

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00641	zf-RanBP	Zn-finger in Ran binding protein and others	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036443	Homologous_superfamily	Zinc finger, RanBP2-type superfamily	Interproscan
IPR001876	Domain	Zinc finger, RanBP2-type	Interproscan
IPR026054	Family	Nuclear pore complex protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23193	NUCLEAR PORE COMPLEX PROTEIN NUP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0006405	Biological Process	RNA export from nucleus	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0008139	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0017056	Molecular Function	structural constituent of nuclear pore	Interproscan