Detailed information of aawi_s0001.g96.t3 in Acropora awi

Genomic Location: sc0000001_pilon:2330808...2354033
NR annotation: XP_029193238.2, cartilage oligomeric matrix protein-like isoform X4 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q06441Thrombospondin-4 OS=Xenopus laevis OX=8355 GN=thbs4 PE=2 SV=1
P49746Thrombospondin-3 OS=Homo sapiens OX=9606 GN=THBS3 PE=1 SV=1
Q3SWW8Thrombospondin-4 OS=Bos taurus OX=9913 GN=THBS4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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