Genomic Location: sc0000004_pilon:3094986...3111510
NR annotation: XP_044175634.1, E3 ubiquitin-protein ligase TRIM71-like [Acropora millepora]
| CDS | ||||
| aawi_s0004.g218.t3 | ||||
| Transcript |
| aawi_s0004.g218.t3 |
| Protein |
| aawi_s0004.g218.t3 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| D5UJ42 | D-inositol 3-phosphate glycosyltransferase OS=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / BCRC 11376 / JCM 18109 / NBRC 3775 / NCIMB 8073 / NRS 134) OX=446466 GN=mshA PE=3 SV=1 | |||
| A1R8N8 | D-inositol 3-phosphate glycosyltransferase OS=Paenarthrobacter aurescens (strain TC1) OX=290340 GN=mshA PE=3 SV=1 | |||
| A0JZ09 | D-inositol 3-phosphate glycosyltransferase OS=Arthrobacter sp. (strain FB24) OX=290399 GN=mshA PE=3 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01436 | NHL | NHL repeat | Repeat | Interproscan |
| PF17170 | DUF5128 | 6-bladed beta-propeller | Repeat | Interproscan |
| PF00630 | Filamin | Filamin/ABP280 repeat | Domain | Interproscan |
| PF20706 | GT4-conflict | Family 4 Glycosyltransferase in conflict systems | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001258 | Repeat | NHL repeat | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR017868 | Repeat | Filamin/ABP280 repeat-like | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR014756 | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR001298 | Repeat | Filamin/ABP280 repeat | Interproscan |
| IPR011042 | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR034464 | Domain | PARP-10, RNA recognition motif 1 and 2 | Interproscan |
| IPR050952 | Family | Tripartite Motif and NHL Repeat Containing E3 Ligases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24104 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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