Gene detail

Detailed information of aawi_s0006.g31.t1 in Acropora awi

Genomic Location: sc0000006_pilon:677465...681153
NR annotation: XP_029200120.2, N-sulphoglucosamine sulphohydrolase-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0006.g31.t1

CGTTAGGGGATTCCTTCTTTGGCGAATTCTATTTCACCTCGCAGCTTTTGGCGTTGTGATCGCTGGTGAAAATGAGCGAAGAAACGTTTTAGTGATAATCGGAGACGATGCAGGTTTTGAAACGCAAGTTTACAACAATACCATTTGCAGAACTCCTAACCTCAACACACTCGCAAAGCGAAGCGTGATATTCAACAACGCGTTCACTTCCGTGAGCAGCTGTTCACCAAGCCGTTCGACCATATTAACAGGTCTTCCACAACACCAGAATGGTATGTATGGACTTCACCATGATGTACATCACTTTAACTCTTTTGATGATGTACGGAGTCTACCTTTGTTGTTACAACAGGCAAATGTGAGAACTGGAATCATTGGGAAGAAACATGTGGGGCCTGAAGTGGTTTATCCATTTGAATTTTCATATACAGAAGAACATCATTCTATACTTCAAGTAGGCCGCAATATCACATACATCAGGGAATTGACTCGAAAATTCCTTCAAGGGTCTGAAAGGGACTCCAGGCCTTTTTTTCTTTACATTGGCTTCCATGATCCACATCGGTGTGGACACACCCATCCTGAATACGGAAGCTTTTGTGAGAAGTTTGGAAATGGAGAGCCAGGCATGGGCCTGATACCAGATTGGAAACCTGTTCTTTACTCCCCTGATGAAGTCATTGTTCCATATTTTGTGCAAGATACACCAGCTGCAAGACAGGACATTGCTGCTCAGTACACCACAATAAGTCGTCTTGACCAGGGAATAGGGTTGATATTGGATGAGTTTCGGCAGGCTGGATTTGAAGATAATACTCTAATTATATACAGCTCTGATAATGGCATTCCATTTCCTACAGGGCGCACAAATCTCCTTGATCCTGGTATGTCAGAGCCTTATCTTGTCTCGTCACCTTATGCCCCAGAGCGCTGGGGAGAACTAAGTGATGCGATGGTAAGTTTGCTGGATATTGTACCCACTGTATTAGATTGGTATGATATCAGCTATCCAAGCTACACAGTTTTGGGGAATGATGTTAAATTAACAGGAAAGTCTGTTTTACCCTTATTACACAAGGAAACCTCAGCAGGCTGGGACACAATATTTGCAAGTCATAACTTGCATGAAGTTACAATGTATTATCCAATGCGAGTTGTTCGAAATAAGGCCTTCAAACTGATCCACAATCTCAACTACAAGATGCCATTTCCCATTGATCAGGACTTTTTTGTGTCCCCCACATATCAAGACCTCTTGAATCGAACCCAAGAAGGGAGGCCTACCAAATGGTTCCGTACATTGGACCAGTATTACTATCGTGATCAGTGGGAGCTCTATGACTTGAAAACTGATCCCAAGGAGCTGAAAAACCTGTTTGGAAAACCAGATTATCAGGGTGTGGTTAAGGAGCTGCAAGGCAAGCTACAAGTTTGGCAAAATATAACATATGACCCTTGGATTTGTTCACCTGGTAGTGTGCTTGAGGACAAAGGAAGATATCCAAAGTCAGGGGTATGTCTTTCTATGCACAATGGCGTTTGACAAGATTTTACTTTTGATTGACACTTTGGACACATAAGTGTACTAATGATTTGGAGAGAATAGAATAGAGGAAGATACATGACATACTGAGATGTTTCTTCATTTACAATGGAATTCAGAAAAATGAACATGATTATGACAACATttccaatttgatcagatggaggacgtccctgaaaaccactttcgggtgagtggagcttcctggggaaatatcaccaattatttattatgattattattaTTATTATTTTCCAACAATAATGTAGCATTGTCTATGTTAGCTGCATGTGATTTTCATTTTTGAGACACTGGGTGCATGCATTATTAATCAATatatgtggtgtcatagaatacataaaactcatatattaaaatgtaaattgaagtgaattttcagggtataatccttgcagtaacgagagctacttcaaagcaggaagaaaggcctggatgggactcaaaaccctgacctctgcaatggccatgcagtgttctaccagtttagccatcaggccagagctggatgttatgtgggt

Protein

Uniprot

Uniprot term	Description
P51688	N-sulphoglucosamine sulphohydrolase OS=Homo sapiens OX=9606 GN=SGSH PE=1 SV=1
Q89YS5	N-acetylglucosamine-6-O-sulfatase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=BT_4656 PE=1 SV=1
P77318	Uncharacterized sulfatase YdeN OS=Escherichia coli (strain K12) OX=83333 GN=ydeN PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16347	SGSH_C	N-sulphoglucosamine sulphohydrolase, C-terminal	Family	Interproscan
PF00884	Sulfatase	Sulfatase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017850	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR032506	Domain	N-sulphoglucosamine sulphohydrolase, C-terminal	Interproscan
IPR000917	Domain	Sulfatase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43108	N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005539	Molecular Function	glycosaminoglycan binding	Interproscan
GO:0006027	Biological Process	glycosaminoglycan catabolic process	Interproscan
GO:0008449	Molecular Function	N-acetylglucosamine-6-sulfatase activity	Interproscan
GO:0016250	Molecular Function	N-sulfoglucosamine sulfohydrolase activity	Interproscan
GO:0030200	Biological Process	heparan sulfate proteoglycan catabolic process	Interproscan