Gene detail

Detailed information of aawi_s0007.g278.t1 in Acropora awi

Genomic Location: sc0000007_pilon:3371594...3392422
NR annotation: XP_029204244.2, T-cell immunomodulatory protein-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0007.g278.t1

GTACCATATATGACGTACCTAATTTGCAGTTGAAAGGACGCCATTTTTTATGTTTTTCACAGGGACCTTGCTGGATGATTATGTCACGAAATATGTCTGGGATCTAAATGAAAGAGAATGAGATGCAAATTTCGTTATTTGTGGCCTTTCTACTCTCCTTGTTGAGACCTGTGTCTTCCTCTTTCAATGATGTGAGCGTGCAAGTAGGAATTTCGCGTGTTAATGGTTATTTGGCGGCGCTTGGTGATTTTAACGGAGACAAGAATACTGATCTTTTTATTGTGACAAATGGAGGTAAAAGTCTTGAAATTTTCTTTTGGCATGCCTCAGATCAACAATTTAAGGAAGGACCAGTTACAACAAGTGATCAGCGCATTTTAAATGTGAGCCCAACGGATTTTGATGGTGACGGATGCCTTGATGTTCTCATGGTGACAGGATCAGGGATTCCTGGGTCATCTGTAAAAGCATATGTGTACTGGGGAAACATGAAATCATTAGGTGAGCACATCAGTCTTTCAATGAGAGACCAGCCCTTAGTTATGGATGCCAATGGGGATCTGTTACCAGACTTGTTTGGTCAATCACCCGAAAATTCCTCATTGCGATACTACTGGATATCAAAGGGATCAAACAGAAGCTTTGTCGAGGTGAAAATCTCTGGTGGTCCATCATCTCCAATCAGGATTCCACACTCCAATGCGTTTTTGGATTTGAGTGGGGATTATACTGCAGATTTGTATGTTACAAACGATCAGAATAAAGGTGAAATCTGGATTAATAAAGGTGGTGACCTTACTGAAGAAAAAACGATTCCTCCTCCCACATCAAAGGTCACTGATATTTTTGGACAGTCAACATTTGCTGACATTGATGGAGATGGGGCTCTTGATCTCCTGTTACCAGTTTGTACAACCGATGACTGTACAGAAAGCTTTCTGTACGTTTACTCTTGGACCAATGAGCAGTGGAAGAAGGTGCTGTCCAACAAAGGAGATCATGTGGCATGGAAGTTTATTGCACCAACGCACCAAACTTCATCCATTTTCCCACTTATGACCGTTAGGACAGGTGATTTCAACATGGACGGGTTCTATGATGGGCTTGTTGTATTAAACATCACTGCAGCAGGTGGGGGCCAACATTACAAACAAGTTGCTGTGCCATTAGAAAATGTACCTTGCTCTGACGAACACGACAACTGTTACAATGGACGCACCTTCAGTGTTCAATGGGATGTGTTATCGAGTTTAGATAACGCAGTGCTTGCCACATTTTTCGACCTGTATGAAAATGGGATAATTGGTTTTCTAGTCGTGACAGAATCTTCACCGGCTGATTATCGTATTCATGCAATGCACAATACACTGTATACCGATGCCAGCTTTCTCAAAGTTGTTGTGCTAGGGGGAAGAACCCTGACATCTTGCAATGGCCACGACCTGCCGTATGGCGTAAACCAGGTGGGACCTTTTATTAAGTTCACCACTACAAGCACAAACGGAAAAGTAAAATATGGAAGCGCCGCTCAGTTGTCGCAGTCAGCGTATTTTGCCCTGCAGTGTCCTTATACTGTGTTTGGTTTGGGGCAAACACCCAACTTTGTCGATGAACTGTCTGTAGGATTACAGAGATCACAAGGATCGCCTGAAAGGAAGCACACGTGGCAGTCAATTATTCCAAATTCTCAAATGATAATTATTCCTTACCCACCAGATGATCCTTCGAGCGTGAAGATAAAAGAGAAAAGCGCCAAGATGCTCACAAGTTTCATTTTGATGCTATGTGAGGTCACGTGGTTTTCCACGCCATCAGAAATGATACGTTAAATCAGGCATCTCTTTTTGAGTTTTCTCTTGCACAGGATTGACACGAGTCGATATTAGTTGTTTGACCGACTgttgtccaatactgtgagataataagattcatgatactttgtgatagatatcacaaagtgtcccctaacccaaatccttaacaaaatagtaacggttttgcaatgcatgaagaacgggacacttggtgacactttgtgatgtctattgtgacgtaccgtgaatctcattatgtgagagcattggacttgtatggttggaacaaacgagaaTTCATGAGGGACTTAAGGTCGAGGGAACCTTTGTTTTTCGATCACTAGTTAACCCTCTACGCAATTTTTAATACAGATAAATGCCGAGGTTCAACGTGAAGTGTTAAAATTATTTTTACGCTTCCTCTTCCTCTATGAAAATGAGGCATGCAATTCGTTCTCTAAGATAGTGTGATACATATTTTTTTTGCAGGTAAAGAAAGCAAATTATTTATACGTGCATCAATGCATAAAGGTTGTAAACATTTCTTTAAAACAGTAGTAGTCTACTATCTTATGTTCATTAGTGATAAGGGACGTACGTAAAGGGAGAAACGTACTTTGGAGGGAATTTGAACAATAATAATAAACAGTATTGTGGTAACTAAAACTCAAACACGCACTCATATAAACAATGTTGTACTAACATGAAGGAGATACACCTCTTACGTGCAAATCATATCCGTTCCTCTCCTAAAATAACTCAAACTCGACGTTTAGGGCTCTAAACTAAAAGGGAAAAGATCTT

Protein

Uniprot

Uniprot term	Description
Q99KW9	T-cell immunomodulatory protein OS=Mus musculus OX=10090 GN=Itfg1 PE=1 SV=2
Q8TB96	T-cell immunomodulatory protein OS=Homo sapiens OX=9606 GN=ITFG1 PE=1 SV=1
Q8R4E1	T-cell immunomodulatory protein OS=Rattus norvegicus OX=10116 GN=Itfg1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13517	FG-GAP_3	FG-GAP-like repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028994	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR024881	Family	T-cell immunomodulatory protein	Interproscan
IPR013517	Repeat	FG-GAP repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13412	T-CELL IMMUNOMODULATORY PROTEIN HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17257	ITFG1; integrin alpha FG-GAP repeat containing protein 1	-	Exosome	ko04147	deepkoala