Gene detail

Detailed information of aawi_s0009.g191.t1 in Acropora awi

Genomic Location: sc0000009_pilon:3422784...3424998
NR annotation: XP_044175419.1, uncharacterized protein LOC114967931, partial [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0009.g191.t1

ttagccgtggaaaagtcgatgtcatccgacagagttctaaaacacgcattCaatgttatttctctttgtgcgccaaaaccattaaaccttgacattgtaaccaActacattcagaaggcCgaggagaatagcaatatgagcacatgtaCagaaggcgaatttaacgacaaagatgtCattggtttgaggattagcaagagctcgctcctgttacttgaagaagacaacggcgaaatttacgttcgcatacatcaagttgtaAgagatgtcatccaaagtcTtatTaaacagctgtcaaagactaaaCgttttcaAgtagttcatgtgtccattttgtctttgaatcaattcatagcagacaaggaagctgacttaaacgactatactggtaatagatttaggttactcgttcctcatttgagattcctttcactGgaaattgaagcttttTtcaaggaaagtgaCtcatctaaagaccccaaaattattacttttaacttgaaAgattatccagactattttagactttttggccggatttgttgcattaatttcgatttgaaagcagcaaaacgttacttcaaaagctgtctggctcttactctacaattgtTagaatctgaacatccttctgtcgcaattgcttacagcgacctagctggtgtacttcgagatcaaggtgaCctgaagGaagcaaaggagtattatgagcgtgctcttgccattagacaacaaactttggggcctgaacatcctgatgtcgcaagttcttataacaacttagctattgtacttggtgatcaaggtgacctgaagaaggcaaaggagtatcatgagcgtgctcttgctattcagcaacaaactttggggcctgaacatcctgatgtcggaagttcttataacaacttagctactgtactttgcggtcaaggtgacctggagaaggcaaaggagtattatgagcgtgctcttgctattaagcaacaaactttggggcctgaacatcctgatgtcggaagttcttataacaacttagctactgtactttgcggtcaaggcgacctgaagaaggcaaaggagtatcatgagcgtgctcttgctattaggcaacaaactttggggcctgaacatcctgatgtcgcatgttcttataacaacttagctactgtacttcgcggtcaaggtgacctgaagaaggcaaaggagtattatgagcgtgctcttgccattaggcaacaaacattggggcctcaacatcctaaggtcgcaagttcttataacaacttagctactgtactttgcggtcaaggtgacctgaagaaggcaaaggagcatcatgagcgtgctcttgctattcagcaacaaactttggggcctgaacatcctgatgttggaagttcttataacaacttagctactgtacttcgcggtcaaggtgacctggagaaggcaaaggagtattatgagcgtgctcttgctattaaccaacaaactttggggcctgaacatcctgatgtcggaagtttttataacaacttagctattgtacttggtgatcaaggtgacctgaagaaggcaaaggagtatcatgagcgtgctcttgctattcagcaacaaactttgggacctggacatcctgatgtcgcaagttcttataacaacttagctattgtactgagtaatcaaggtgacctgaagaaggcaaaggagtatcatgagcatgctcttgctattaggcaacaaacattggggcctcaatatcctgatgtcgcatgttcttataacaacttagctaatgtaattagtaatcaaggtgacctgaagaaggccagggagtatgatgagcgtgctcttgttattaggcaacaaactttagggcctcaacatcgtaatgtttgtaggttgctgtaagaacttagctactgtacttaaatatgaaggtgacctgaaggaagcaaaggagtatcatgagcgtgcttttgctattaggcaacaaactttggggcctcaacatcgtgatgtcgcaagttcttataagaactttgctgctttgctttgtgatcaaggtgacctggagaaagcataggagtatgaggagcttgctcatgctattaTTTTATTTAGCCTACCTCGCTTCACTATTGGAGACAAGTGACGATAACGAAAATCCGCGTGCTTCTAATCGTGCTCGTCGTAAGAAAAGATATGCGATTGT

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|PB1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13374	TPR_10	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan