Detailed information of aawi_s0010.g167.t1 in Acropora awi

Genomic Location: sc0000010_pilon:3197084...3207664
NR annotation: XP_029205270.2, DNA repair protein RAD50-like [Acropora millepora]
Species Acropora awi · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A1L8GXM0DNA repair protein RAD50.L OS=Xenopus laevis OX=8355 GN=rad50.L PE=1 SV=1
Q92878DNA repair protein RAD50 OS=Homo sapiens OX=9606 GN=RAD50 PE=1 SV=1
P70388DNA repair protein RAD50 OS=Mus musculus OX=10090 GN=Rad50 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001857 (this species only)

 Pfam domain
No Pfam domain signature was detected for aawi_s0010.g167.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
No InterPro signature was detected for aawi_s0010.g167.t1. This gene does have a gene model — the search simply returned no hit.
 PANTHER
PANTHER termDescriptionSource
PTHR18867
all species →		RAD50Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000722
all species →		Biological Processtelomere maintenance via recombinationInterproscan
GO:0000794
all species →		Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003691
all species →		Molecular Functiondouble-stranded telomeric DNA bindingInterproscan
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan
GO:0007004
all species →		Biological Processtelomere maintenance via telomeraseInterproscan
GO:0030870
all species →		Cellular ComponentMre11 complexInterproscan
GO:0032508
all species →		Biological ProcessDNA duplex unwindingInterproscan
GO:0043047
all species →		Molecular Functionsingle-stranded telomeric DNA bindingInterproscan
GO:0051880
all species →		Molecular FunctionG-quadruplex DNA bindingInterproscan
GO:0070192
all species →		Biological Processchromosome organization involved in meiotic cell cycleInterproscan
GO:0090305
all species →		Biological Processobsolete nucleic acid phosphodiester bond hydrolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for aawi_s0010.g167.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP