Detailed information of aawi_s0011.g19.t1 in Acropora awi

Genomic Location: sc0000011_pilon:215306...245628
NR annotation: XP_029199018.2, protocadherin Fat 4-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q24292Protein dachsous OS=Drosophila melanogaster OX=7227 GN=ds PE=1 SV=3
D4ACX8Protocadherin-16 OS=Rattus norvegicus OX=10116 GN=Dchs1 PE=3 SV=2
E9PVD3Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21035CCDC138_CCoiled-coil domain-containing protein 138, C-terminalRepeatInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF21037CCDC138_ccCoiled-coil-domain-containing protein 138, coiled-coilCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR048750DomainCoiled-coil domain-containing protein 138, C-terminal domainInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR048751DomainCoiled-coil-domain-containing protein 138, coiled-coilInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16669FAT4; protocadherin Fat 4-Cell adhesion moleculesko04515deepkoala

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