Detailed information of aawi_s0014.g3.t1 in Acropora awi

Genomic Location: sc0000014_pilon:65119...81715
NR annotation: XP_029184376.2, LOW QUALITY PROTEIN: ranBP-type and C3HC4-type zinc finger-containing protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q62921RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Rbck1 PE=1 SV=3
E6ZIJ1RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Dicentrarchus labrax OX=13489 GN=rbck1 PE=3 SV=1
A9JTG5RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio rerio OX=7955 GN=rbck1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR051628FamilyLinear Ubiquitination-Associated E3 LigasesInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR047559DomainHeme-oxidized IRP2 ubiquitin ligase 1, modified RING finger, HC subclassInterproscan
IPR047558DomainHeme-oxidized IRP2 ubiquitin ligase 1, BRcat domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR047557DomainHeme-oxidized IRP2 ubiquitin ligase 1, Rcat domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22770UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0097039Biological Processprotein linear polyubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10630RBCK1, HOIL1; RanBP-type and C3HC4-type zinc finger-containing protein 1EC:2.3.2.31
Ubiquitin systemko04121deepkoala

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