Detailed information of aawi_s0015.g130.t2 in Acropora awi

Genomic Location: sc0000015_pilon:1458845...1476089
NR annotation: XP_029193083.2, LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX43 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NXZ2Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens OX=9606 GN=DDX43 PE=1 SV=2
Q86TM3Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens OX=9606 GN=DDX53 PE=1 SV=3
Q755N4ATP-dependent RNA helicase DBP2 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP2 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00013KH_1KH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47958ATP-DEPENDENT RNA HELICASE DBP3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17043DDX43; ATP-dependent RNA helicase DDX43EC:5.6.2.7
Spliceosomeko03041deepkoala

TOP