Gene detail

Detailed information of aawi_s0015.g74.t1 in Acropora awi

Genomic Location: sc0000015_pilon:782342...789547
NR annotation: XP_029192825.2, hydroxyproline dehydrogenase-like isoform X3 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0015.g74.t1

GGAAAAAAAAGGGACAAGAAAAAGTTGCATTGGCAAAAACCGTCTTGTATCGTGCAAGAGCCCTTTTGAAGAATAGGCACAGATATTACATCAGTCTTGAGTCTGGGGATTTTTAGGGTCCGGCTAGCACCTACCCTTCACTTGCCGGCTGCTAAATCTCGCTTTTTTAGGGTTTCACGGTCTGAGAAGAAATAGGAAGAACGCCTCAAAGGGGTAAAATTCGCCGGAGAATTATGATTACGCTACCAAGAATTCATCGATTTAAGTTTATAAAACACCATATCCGCTGTTTTCAAGGCGCTAGTGTTGTGTTCCGTGCGATCGAAAGCACTTCTGTCGCAAGAAGCTTCCCAGAGGAAAAACATTCGGAGGACAACAGCAATAACGCAAGGATTTTCGCATCGAAGGAGACAACCAAAATTCTCCGATCTATTCTTGTTTTGAAGCTTTGCTCCTATGACTTTGTAGGCAGAAATTCCATGGCGCTCATGTCTTTTGGCCAAAGAGTCCTAGGGAAAACTCTGTTTGAATTTCTATTGCGAGAAACTATGTACAATCAATTTGTAGCTGGAGAGAATCTACCAGCAATTCAAGACACAGTTAAGTCATTGCGTCAATGTGGAATTGGTACAATGCTGTGTGTGCCTAATGAGGAGGATCTTTCATCTGACAACAGTAACTTTACCGAAAGGGAGGCCTTGTTTGATCGAAATGTGGAGGCAATTCTCGATTGCATTGGGAAAACTGAGGAAGGAGGCTTTTCTCAGATGAAAATTACGGCAATATGCAGTCCCTTGTTATTAAATGTATGGAATGACTATGTGATGCCTTACAAAACAAGTGTAGAGACACCGGTGGGACTGGATGTTCAGACATTAGCAGAAGGCTTTGATCGCAAGATTGAGTTATCTTTTTTCAACAAAAATCAAAATGCACATCTTCAAAATGCCCTCGCAAGATTGGATACATTTGCAAAGACATGTATAAATCACAATGTAAGACTGGTGATTGACGCTGAACAGACCTATCTACAGGCTGCAATCAATCATATGGTGTTAGCTCTGCAGGTCAAGTACAACAAGAGTTATCCTTGGATCTACAACACTTATCAATGCTACAGAAAGGATACTCATGACATAGTAAAAGCAAATTTGAAGTTAATGGCAAAACTTGGTTTCCATTTTGGAGCAAAGATTGTGCGTGGGGCCTACATGACACTAGAACGAAATAGAGCTACAGAAGAAGGTTACAAGGATCCCATTCATGACAAATATGAAGACACCTGCACTATGTATGATGATGTGGTTTATACCATTCTGAAGAAGGCCAGTTTCACACCAGCAGAGGTTATGGTTGCAACACATAATGAAGAATCAGTCGAACTTGTTATACAAAGAATGAAACAACTTGGCATTACACATGATTCTGGGAAAGTTTCCTTTGGGCAACTTTATGGAATGTGTGATCAAGTTTCATATTCGTTGGGACAAAAGGGTTATAATGTTTACAAGTCAGTCCCCTTTGGCCCAGTAGAAGAGACTCTAGCTTATCTTGGAAGACGAGCAGCAGAGAATAGAGATGTTATTTCAAGGACAGAAAAAGAGAGATCACTTTTGTGGCTGGAATTAAAAAGAAGAATGAATACAAGGCCCCTGCCTGTCAATTAGGAAAACTCAAACTTTTTCACTATGACCTTTTATTAATTAAAGGCCCAACTTTGGTGTAAAGTAGAATAACCTACCTAGTTTATTAGCTGTGCTTTTTGGGCAGGATAACTGCAAACATTGTCATGAATAACTGACCACATTTAATATTTATAATATTAAATGAAACAAGTTTTCTCAAGTGAGACAAAATGGCCACATTAAATTGAGAAAAGTTTACTCTAGTCACTGACCATGCAATTATTATAGAAGAAATGCAAAATTGTGCAAAAACCATCAAAACCAGCAAAAGTACTGTCATCATTATGGTTAAGTGTGTGGGAGACATGGTGAAAAGGAAAGAGTATAGCTTTGGAAATCAGGGAATACAAACCGATTACTACTAAAATTCGACACCAAAGTGAAGAACAAATATTATCTTGAGGCACTTCCTCCATGCCAATtttttcttgtttatattattaattaggaatcacttgcgagtttttcaaaaagctgaaattgcactcaccaaagtggctcttgcaatttcagctttctgaaaaactcaagtgcaaattaattccaaattgaacaagaaaactgtatgattacccacactaatCTCAATGCAACATTATTTCTTCTTAACCTTATAAACTATATTATGTCAA

Protein

Uniprot

Uniprot term	Description
Q9WU79	Proline dehydrogenase 1, mitochondrial OS=Mus musculus OX=10090 GN=Prodh PE=1 SV=2
O43272	Proline dehydrogenase 1, mitochondrial OS=Homo sapiens OX=9606 GN=PRODH PE=1 SV=4
Q6PAY6	Hydroxyproline dehydrogenase OS=Xenopus laevis OX=8355 GN=prodh2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01619	Pro_dh	Proline dehydrogenase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015659	Family	Proline oxidase family	Interproscan
IPR002872	Domain	Proline dehydrogenase domain	Interproscan
IPR029041	Homologous_superfamily	FAD-linked oxidoreductase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13914	PROLINE OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004657	Molecular Function	proline dehydrogenase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006562	Biological Process	proline catabolic process	Interproscan
GO:0010133	Biological Process	proline catabolic process to glutamate	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00318	PRODH, fadM, putB; proline dehydrogenase	EC:1.5.5.2	Arginine and proline metabolism	ko00330	deepkoala