Gene detail

Detailed information of aawi_s0017.g104.t2 in Acropora awi

Genomic Location: sc0000017_pilon:1364741...1390529
NR annotation: XP_044182722.1, LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase gamma-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0017.g104.t2

GGCGGCAGGCACCGGCAGAGGAAGTAATCGTTGGAATTAAGCAATGTGGGCTCATCTGAGCTTTTTGTTTCCACACCTTCACAGTATTTTCTAAGCATCTTTGTCAGCATGATCTGGGTGGTAGGATTTTGACGCATTTTCAGAGGCCAAGTTATGACCGAAAGATTTGTGGGAGAGGGCCGTGACACTTGTACTACAAATTCCTGGATTGTCAGTTCTGTTTATGTGTCCCTGTTATATACATTATTCCTTTGTTTTGGACTCTCTTTGTCAGCTTCATCTGAAGAAATCGTGGTAGAGGAGGGCAAGAATGTAACCCTTAATTGTTCTTTATGTGGATCTCCTATAAATTGGACATCACCACTGAATGAAAGCCGGAATGGTCAGTATTTTCACATTTCAAACTTCACCTGTAACAAGAATGGGCCTTACACTTGTCGCAACACATCTTGCTCACAAGAACATAATGTCAAATGTGCCACACATGCAAATAACAACACAACGACACCACCTGGAAGTAGCATAGCTTTCGTAATTGTCGTTGGAGTCATGCTTCTATACAGAAGACGGCTCCACTGTTGTTGTAAGGCCTACTGTAATGGTTTCTTTAGCGTGCAGGCTGATAATCCGCCGTCAACTCCAAGGCGACGGACGAGCCTCCTTAGTGTTACAAAATTAAAACATGGGGTCATTCAAGTGGATGATTTTATTCATCATGTAAGAATTTTACACACTGACGGAGACTACAGATTCAACCAGGAGTTTGAGTCACTGAAAAATGTTCACGTGAAATGTCGCTCGTGGACTCATAGCGATCACCCAGAAAACCAAGCGAAAAACAGATATGGGAATATAGTTGCATACGATCACTCGAGAGTAGTTCTTTCGCCCTTGGAAAACGACCCCGAGTCTCACTATATTAATGCAAATTACGTGGATAGTTTTAAGAAAACGAATGCCTACATAGCAACTCAAGGACCTCAGCCCCAGACCATTATCGATTTTTGGCGAATGGTTTGGGAGCAGAATTGTACGATCGTCGTTATGATTACCAAGACCATCGAAAAAGGCCGGCGCAAGTGTGAGATGTACTGGCCCACTAATGAAGCGAGAAGCGAAGTGCGTGGGCCACTAAGAATTACTTACGTGGACGAAGAAGCGTTTGCTTTTTACACTGTGCGGAGGTTTGAAGTGAAACCAGTGGATCAGAAAAGTCACTACTGTCAGGATATGGCTGAAGATGAAGTCAAACCGATGATTGTGTCCCAGTATCATTTCACTGGCTGGCCGGATCACGGCGCTCCAGACACTGGCTGTGAATATCCTGCGCTAAGCTTCATCCTGAAGTCAGCTAGTGCAAGTCAAGATGGGGCGGGCCCTATCATTCGGTTAAAGGAAATCGAAGTCAAGCATTACAATCTGAAGCAGGCAAGACGAGGCTGCAACATTGCGAAAAACAGATCCGTGGATTTTATACCAGCTGACAGTGCGAGAGTGGAACTCTACCCTCGTCCAAGGGAAGAAGGATCAGATTATATCAACGCAAGTTATCTTCCGGGCTTTTGGAAGTCGCAGGCTTTCATCGCCACGCAGTATCCTTTAGAAGACACCACAAATGACTTCTGGAGGATGATTTGGCAGGAAAATTGTCGCTCCATTGTGATGTTGATCAGTAAAGCGGAACTTGAACTTGACTACTATCACAGTTATCTACCAGCTGAGAATGAACGAAGCAGGTTTGGTGAATATGAAGTGACATTAGATTCTGTGCAAACACGGGGCGACGTTGTGGTCAGGGAGATGAGAATGGCTTCCATCAAGGATCCGAGCGAGTACAGAAATATTCGACATTTTCATTTCCTTCATTGGCCAGAGAACGGTAATCCGGGGTCTGGGCAAACTATTCTTCAGCTAGTCGATAAAGTGGACAGCTGGGAGAAAGAGGTCGCAGAAAGCGCAAATCCAAGTGAAGTCATTGGATCCATCGTGGTACACTGCAACTATGGCATTGGTCGGACCGGCGTATATTGTATATTGCATGCCATGTTTCAGCAGATTGCTCGTGAGAAAACTGTATCCGTCTTTCAACTGGCTCGCTTGTACAATCACGTAAGACCTCACTGCATATTAGACAAGGTGCTTTACGAGTTCTGTTACAGTACATTGATCGAGTACATCGAGGCTGACTGTTCGTTACATCTGGTGTGACGATACTCGCTGTACGTGACATTTGCCAAGCACTGGGTCTTAGACACTCTATAGTGGCAACGTCTGAGTTTTTTGAGAAAAACGATGGTAAAGAGAAGCGGTTGGTCACCCATGTCACGCAGTTGTAGCTACAATAGATCTCTAGACTATCTTCTAGGAGAGTGGACCAGAGCCACTTAAATCCAGGGATACACGTAATTAGATGTAAGCTCAAATTTGATACACTTCGCAAAGTTTAAACTACCTTTTTATATCTTTcTgttagggttattttccaggtcagaagtcagaatttgcgtactgtttttgtcttctcgaggagaggagttttgaggacaccttatgacatataatgtccgtTCGTCACACTGATGTTTATTGAAATGTAATCGGCTTGGAGCAAGTACGTGCATTTCTTGACGCATCTCACCGACTCATGCAGGGGTTACTCTTGGGTACAACACTAAGATAGGTGTTTGCAATGCGATAAAATAAAAGAAAAAGTAGCGTATTGTTGGCCGCAAAGACCGTTTTAACTATAGTTTGGTAGAGAAAAGAGATATTCTTACTTTTTGTACTATAATAATTTCTTCTTGAAGTAAATATGTATTTAGTTAGTTTTGGAACGATAATAACTTTCTTTTGTGCCAGATTTTAATTTAATCGTTGGTTGTTTTTGTAAATTTACATTTCTGCGCGATAGTTCTTTGAAAAGGAATGGCGATTGTCACGTTAGTTGCCAACGGTGTTTTTACATCAGTCCAACTGTCAAAGGGTCTTGCGTTATGGTGCGTGCACGTGCAGAAGTTTCCAGAATTAGAATAGGTTTCTTTTTAAATTTGAGATGCTGCGGTTCTCTCCGCTAAGATTTGGTTTTCGTGGAGACAGTAGAGCAAGGAATTCACAGTTTTTTGTATGTCAAGATTTAAGACTAACTCACCTTTGATGTTGTTTTTTTTTTTCTTTTTATCCTCAAGTTACAATCGATGAATAGATACTGCTAGGATTTTCACCCGCGTACAGTAAGATTACAATGAAGATGCTGGGGCTTAGTCCAATTGGAAAAACTAGAACGATTTGCCGCCCTGAGCTTTCTCCGTTTTCTAAGACCTCTACACGTGTCAATTTCGGAAAACCTCCGTTCTCTTGGGTTCGGAAAGGCTGCATGCTCTTGGCATTCGGAAACTTCCGCTGCCTTGGCGTTCGGAAGGGTTTCGTGCCCTTGGCGTGCGGAAAACTTCCGCTCTCTTGACCTTCGGAGAGGCTTCGTCCGTGTTCGGCGTCCTAGTGGTCGAGTATTCAGTGTATTGTACGTTATTCCAGCTTGAGAACCACTGAATATATTTAAGAGTGATATTTTAATTTCGAAAGTGTAAACTTATTTTTTGGTGTATATTGATCATCGTGTACATAGTCAAATGATTGCATGCGTTTATTGTTAGATATGTCTAATACAATATCGATTAAAATAAAAGTTAAGTGATTTT

Protein

Uniprot

Uniprot term	Description
P23470	Receptor-type tyrosine-protein phosphatase gamma OS=Homo sapiens OX=9606 GN=PTPRG PE=1 SV=4
Q05909	Receptor-type tyrosine-protein phosphatase gamma OS=Mus musculus OX=10090 GN=Ptprg PE=1 SV=1
Q98936	Receptor-type tyrosine-protein phosphatase gamma OS=Gallus gallus OX=9031 GN=PTPRG PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR050348	Family	Protein-Tyrosine Phosphatase	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19134	RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan