Gene detail

Detailed information of aawi_s0020.g138.t1 in Acropora awi

Genomic Location: sc0000020_pilon:1909073...1919807
NR annotation: XP_015754974.1, PREDICTED: uncharacterized protein LOC107334550 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0020.g138.t1

GTGAAGATTTTGTTCTCACCTTGTTGCAAACTTTTTCTGCCTTCTTGATTGCGTCTTCGAGTCAGCGTTGGAACTTAACAGCAACTGAATCAGCCAATCAGTGACTTGAATGAACGAAATAAATTGAGACCCAATTTCCAAACTCTTCCATTCGCCTTCGAGTAAAGGGCGTCTCTACAGGATGAACTGAAGTGCAAGAAGATTGTGCCGTGTTCTAGACAAGAAAAGCTGGAAGAAGAGAAACTTTGGATGGACCATAATTAAGATTCTTCTTTCAAAAAACGGCCACCTACTACTACAACCTTCGATAACGGCCAAACAcatcaaagatcagctcaatggaataagaacacttactattgacattcaaaccataatgttgacctcataaagtcaaacccactccacattgatgttatcaacgaaatagaaacaaatacctcctaacaatgacttccaaataAAAATTACCATCTCTCCTACATTCAAACCACACTAAACGGAAGTTCCTTACACCTTTTCATTGTTGCAGCCACAATCAAAACAcCATGTTGTCTCGTCAGCCAAATAAAAACCAGTTCCTACACCTTTCTTAATGAAACCAGCACGATTACTGGAAAGGTAGAAACGCACAGCTTCTCAATTGCAACCTGATGCACCTTTTCACTTCAAATAGCCGCCAAACTAAAAGCTTGCTTCCAATAAAAAATGTAGTCATGCAAATCGTATGTACACTCTTCGCTGCTTACTTTAATTTGAATTAACTTAATTAACTGTACCAACCAACACTGCTCCATCGAGCGCATTTGTTGTTGTCAGTTTTTTTTCCAGATCTCTTCGTCAGCTCCTTAAAACAGCAACAGAAAGTAATAAAGAGTCGACAACCGAAAGACGCGCACAATCGCTCTTCTTTCCCAAGAAACAGCCACCTCCTGTCACAACATTCAAGAGCCGCGATCACCTCAccacattgatgttatcaatgaaatagaaacaattactacctcctaacaatgacttccaaataCTCTACATAAACAGCTCACGTCCCAGGATACACGTTGCAATACCAAAGTTTGAAGGATGGTGATGGGAAAAGTCTGATTTTCACTGCTGTACTTAGTGGAAAAGGGTTCATGCTTGAACATCTATTGAAGAAACCAAGAGTAGATGTAAATGAAAAAGCACCATCAGGCAACACTGCTCTTCATGCTGCCGTGAATACTGGAAATATCAGCATGGTCCAAACACTGATCAACGCTGGGGCGAAAGTCAATGCCTGCAATGCTGAATGTGAAGGTGCAACACCGCTCCACCTAGCCGTTATGGGAGGTTAGTTATAATAATAATTCTTTGAACCCACATCTCATTTTAAAATTAGAGGAGGTACATTCTGTTGTGCCTACTAGAAATAGATGACTGCTAATTTTGATAAGCCTCGTAAAGCATTACCTTACTCTTTAAGAAATACAGATAATAAAGGTCataataataattataattcgatgtatttccctccctttcattgaccaagagctcaccacgtgacctgcaaataactccatacgaataagtgttttgctgcaaataatgttctgctcatgctcaatgaaactacActcttgtgtgaaaatagcggttCggttccctgagcaggcagagagtgatttgatatatttagtggagaaaaagaatggtgatcGaatggtaaaacaattattgaactcGgttatcacaaaatatcatgatttgccagtgtctcgcagatcaataattatttgcctcagcctttggctttggcaaataattgatctgctcgccactgacaatatttcacaatattttgctcaacctcatccaataattgttaattatttgTGACCTCCCGACTCTGCTTGTCAAGTAAGTAGGTACATTTAAATTTTGATGTGCACGCTATAAATAGATGTATGCCAATTTTGGTAAGCCTCACAAATCATCTCCTTACCCTTTGAGAAATACAGATTATAAAGTGTGATGATTATAATTATTATTATATGCAACCTCTTGACCCTACTTGTCAAGGATTAAAAAactgtaacgtaaatcctaacccgaaaagtaaccacaacataaacatttacccttgtgttatcaacatgtagtttatgcttagactgctcaggacactAAATTATCATTTGCATTTGTGGATGTAAATGTGTTGGGGACTGCTGTTCAAAGTTTAATTTGTGCAAGGGTTGTGGAAGGGGAAATGATAAGGTTCTAAAGAAAACAATAGAAATCAACATGCCATGGACTGATGAAAATAAATTATTGAAAGTTTGGTTTCCCTTTATTTGGTCCGAGGTTTCACGCTCTCACAATGCTCAATTTTTTTCAAAGGTACAGCTCTAAGATTAAATGGAAATTGTTCTACTGTGACTCATAACAAATCAGGCCACTGAAATCTTTTTGGTTGTGAATTAAGCCAGTCTAGATGAATGTACTGTAATTGCAGCTGAAAACTTAATATCAAAACCTCTGCCGACAAAGATGTAGCACTTCATTTCAATAACAATAATTTGGTTTATGGTTGTtgtgcatccattacctcatggacatacactaaccatgaaccaattcgtgggtaacaaAAGGAGTAGAGACCTGCGTCTGAGATGCAATTGCGAAGCTTGCATGGATAGTTTGGCTGGACAAACAGCTATTCTCAAAGTGGAAGTTTCATGTCCAAGAGAAATGCCTCTCCAGTTTAACTGCTGCATGCCAGGCTCTATCAAAAATGTTAGCTCAAAGGGACCTACATTATAAGATTCCAAGATGCAAAACTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24124	ANKYRIN REPEAT FAMILY A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan