Detailed information of aawi_s0020.g85.t1 in Acropora awi

Genomic Location: sc0000020_pilon:1161683...1193288
NR annotation: XP_044176026.1, receptor-type tyrosine-protein phosphatase S-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P70490Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1
P21956Lactadherin OS=Mus musculus OX=10090 GN=Mfge8 PE=1 SV=3
Q9QWJ9Neuropilin-1 OS=Rattus norvegicus OX=10116 GN=Nrp1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF15102TMEM154TMEM154 protein familyFamilyInterproscan
PF18861PTP_tmTM proximal of protein tyrosine phosphatase, receptor type JFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR028064FamilyTransmembrane protein 154Interproscan
IPR041201DomainPTPRJ, transmembrane domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24543MULTICOPPER OXIDASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP