Gene detail

Detailed information of aawi_s0021.g68.t3 in Acropora awi

Genomic Location: sc0000021_pilon:1000908...1027369
NR annotation: XP_015754712.1, PREDICTED: titin-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

aawi_s0021.g68.t3

TGTCTGCCCTGTCATGAACTGTGACTTAAAAGCTTTGCTCACTTCGCCAAGGTAGCTTGTGGTGGACACTTCAAAAATCCTACCTCAGCGTCTTTCAGAGACAAGAAAAAACAAACCTAAATTTCTTCAATTTGATTGCAAGATATGGCAATCTGGTCAGCTGTAACACTGATTACGATAGCTGTCCTCTCTTTATGTGGTTCTGTCAACGGTAAATTTGGGATTCATCCACCCTATCCAGATAATCAGCAAGTGATCGAGTATACTTCTGTCGCAGTTACTTGTGCTGCCTATGATACTGAGGGTGTTAAAAAACCTGAGCGAATTGAGTTTCTAAAATGGACAGACGACCCAGTTGTTCTTAAAGAGGATGGAACTATTTACTTCACGAACAGAACAGAAGACGATGGAAAAAAACTCTTTGTCACTCTTCACATTCAAAATGTTACAAAGGAATATGACGGTCAATTAACACAGTTCTTGTGTAAGGGGTACGCTGCTGGTGTACAAGATCAAGGAATGGCCTTTAGAATAACCGTTATTAAAAGAAAGGAAATCCCCCAAATCGAAACGACCAAAAAAAATGCGATACTTCAGCGCGGCGACGAGACCACAATTTCCTGCCGCGTTACGGCTAAAGGAAGCTCAAACGCGAAGCCAAAATATATGGCATGGTTTAAAGATGGAGAGTTGTTACACAGCATAGCAGTTAATCAATTGTCTTCCGAACTAGAGTTCAAGTCCATTGTGGTGACTACTGACCAGGTCCGGAACGCTGGCAATTACACCTGTGTTTTGGCGGTGAAGCTGTATAATGTCCTCGATCATAATGAATCAGATAGCACGGTTGTTACGTTTTTGCCGTGGTTTGAAACGGAGAAAAATGTAGAAGCCGGGATTATTGGAAAAAAAATCAAGCTAAAGTGCAGCGCCAGAGGCTATCCATTGGACGTGGAATGGAGAGTTACCAAGAAAATTGCAGAGGACAAGACGGTTACCTCTTGTATAAACGCGTCAGCAGATAACCGTTTCGAAATTTCTCGGAAAGGAGTATACGACCCTTATGTTCTTTCCATCGTCAACTTGAATTCAACCGATGATGGAGACTATTACTGTTGCCTGGCGTCAAACTGCTCTTCAAACATTGAGGGGATCTGCGAAAGTATTCGGCTTTTTGTCATCGATCCCTTATCGGGTGCTTCAATGGATTTGTCTTTACCTTGCCTGATGCTAACGCTGTTCATCCTTGCAGCAGCATCACTTTTGAACTTTTAGACAAAACAAATGAATAAACAGCCGTCACAACTCCGACTTCAAGGCCTGACCAGTAAGCCTTTTCGCATCTGCCGGCAGATAATTAGGAGGTCCGTCCGGACTTCTATACTCAGTTCAAGTGCAGGGTTGACGTTTGTGTGTTTCAATTATTCAAATCAGTGTTCGCTGTAGACGCTAAGCTGTCAGTGCCATTCACCCTTTGCTGGCGAGCTTTGGCATGATTCCGAGCCCATTCAGTAGCAAATAAATAAAGGTGCGTCAAAAATCGGAAAATGACGAACGCGCTAATAGTTTGGTGACAAAAAAGACAAAATTATATGCCACGATGGATGCCACCAATTAAAAGTATATGATTGAAACAATAGCCGAAAGAATCACGTCTTACCTACTTAAGGACCGTAGGCATCCTTTTGGTTCCTTGACCATTTGATTACATGATTACTGTTCATGCGTTAGGATTGTAAAGGGGGATGTGCCATCCGAGATCTCTGttttgtattgtttttgttttgtttttgttttttgcttttgtttttgtttgtgtttttgtttttttCAGTCTTAGAGTTTAACATCAGAATAATAATATGCATCACGTAGAGATCAGCAGTGACACAACCCTTGGCCTAGTTTCCTCATGGTTTACTCGTGATGCACTTGCGATTTGGCATTTACGTGAAACTACCGACTGCTCTCGATGGAGCTATCCCGGTGTTGGGAAAGACCTTGTTGAGCTGCAGTTAACAACCAGAAGTCGGTGTTTCTCATATAAATTACGGGATatttttggctgattctcggtgtaagagcctgtcaaactcacggatagtgtcacgatcaagaaaacaaaagagccaaggggccattaaacaattagttaactccatcacgagctaacgaaacaaaagcatgtcaaaggttcttgcaccgaggtaaacccgtattatatggcaacttattTCAGTAGATTTTCTTTGTGCAATTTAATGATGTGTTTGTTTGCTTCAAAGCAGAATTACCTCGAAAATCTAGATCACAAATAACTGTTGACATAAAAATAGAATAGTTTTCCACGAAATATTTTGGAAAGTAGGACTATTCTTCATCTGAATGTAACAAGTTAAAAATAGTTTTCTTTATTCGAGAAGGAAGTGTGTGCCATTAAAGAATTGTGTGTCCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10075	BASIGIN RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007411	Biological Process	axon guidance	Interproscan
GO:0030424	Cellular Component	axon	Interproscan
GO:0070593	Biological Process	dendrite self-avoidance	Interproscan
GO:0098632	Molecular Function	cell-cell adhesion mediator activity	Interproscan