Detailed information of aawi_s0024.g40.t1 in Acropora awi

Genomic Location: sc0000024_pilon:731455...750860
NR annotation: XP_029186459.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114954128 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G5EDK5Cadherin EGF LAG seven-pass G-type receptor fmi-1 OS=Caenorhabditis elegans OX=6239 GN=fmi-1 PE=1 SV=1
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07974EGF_2EGF-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR051830FamilyNeurogenic locus notch homologInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR002126DomainCadherin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06052JAG1, CD339; jagged-1-CD moleculesko04090deepkoala

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