Gene detail

Detailed information of aawi_s0030.g121.t1 in Acropora awi

Genomic Location: sc0000030_pilon:1657617...1667643
NR annotation: XP_029185246.2, cationic amino acid transporter 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

aawi_s0030.g121.t1

ATGCCGTATGGATTCTCTGGGGTGATGATCGGAGCTGCAATCTGCTTTTATGCTTTCGTTGGCTTTGATGTAATTGCAACCACTGGAGAGGAAGCAAGAAATCCTTGCAGAGGAATACCTATTTCAATTGTCTTGACTCTCGGACTCGCTCGCAAAAAGATCATCGAGGCAGATACTCTGACTTCAACCCAACTGAAACGCCGTGTGTCCACATTTGACTTGACCGCCCTCGGCGTTGGCAGCACAATCGGGGTTGGGCTCTGCATAAACATTCTCGTGATTCTGTTCGTGGTAAGCGTTGGCGCTTGCTACGCTGAGCTAAAGAACTGGACTGACAATTTCATGCCGTATGGATTCTCTGGGGTGATGATCGGAGCTGCAACCTGCTTTTATGCTTTCGTTGGCTTTGATGTAATTGCAACCACTGGAGAGGAAGCAAGAAACCCTTGCAGAGGAATACCTACTTCAAATGTCTTGACTCTCGGTAAATCCCTCGCAAAAGTTAATCCCAGAACAGAAATCCCAACCATTGCTACAGTGGTATGTGGTGTTCCCTCCGCACTTTTTGCCTTTATTTTCAACCTGCACGACTTGGTGGAGATGATGTCAATTGGAACCTTGCTGGTTTGCACGACTGTGGTCGTTTGTGTGATGGTGCTAAGGTACAGACCAGAAACGCCGGCCTTTGTCAGACAAAACGACCTAGAAGAGGGCGCGGAAGGCCAAACAGAAAGCAAAAAACTGGAAACGAAAGAAGATTCCCCTCTGTTGGGGATCCTTCCAACACAACAACCTTCACGTAAAATAGCCTCTGGCTCGCTGGTGGTCATTATAATGAGCAGCTTTGGTATGGTGGCACTCAGCGCGTTGATTACATGGGGATCTGATTACCTCTCTCTGGTAAAATGGTGGGCTGTTTTGCTGTTGGCTGTAATAATCTTTTATCTTATTAGTTGCACCTTGCTTCTTCTCTGGCTGCCACAGAACAAGACTCCTCTTCCCTTTATGGTCCCATTTGTTCCTGTGCTTCCACTTGTTTCAGTGTTTATCAACGTATTCCTAATGCTGAAGCTGTCTTACTTAACGTGGCTACGTTTTGCTGTCTGGATGGTAATCGGTCGTTCTTTGTCCCTGCTTGATTTGATTTCTCTCGGAGTTGGCACCACCATTGGCTCGGGAATATACGTATTAGCAGGCGATGTCGTTCGTGAGGATACAGGTCCGAGTATTGTTATTTCGTTCTTGATCGCCGGCATAGCATCCATTCTTTCGGCTCTTTGCTATGCTGAATTCGGTGCCCGCGTGCCAAAAGCGGGCTCTGCCTATGTCTATAGCTATGTGACAATAGGAGAACTCTGCGCGTATGTAGTAGGTTGGAACTTGATTCTAGATTACGTCACACAAATTTCTTGCTATGCCCGTGCAACAAGTTCTTACATCGATTCTCTCTTTGGCGACAGAATTGAAAACTTTACCATCTCAACTATTGGTAAAATACGCACTGGTGATATCGTCGTATATCCTGACCTGTTGGCAGTGCTAATTATTTTCATAATAACCATTGTCCAGATCGCCGGAATGAGGAAAACTTCCTGGTGTATGAAACTCACAGCTGGAGTTACGTTATTCGTGGCTTTTTTCGTGGTGGGCGTTGGCGCTTGTTATACGAAGTCCAACAACTGGACAGACAATTTCATGCCGTATGGATTCTCTGGGGTGATGAGGGGAGCTGCAACTTGCTTCTATGCGTACAATGGCTTCGAGGTAATTGCAACCACCGGAGAGGAAGCTCTAAACCCTTCCAGAGCAATACCCATTGCAATAATTTCGACTGTTGGCATTTGTTCCTTGGCGTATTTTGGTGTTTCAGGAGTACTAAGTCTGATGTGTCCCTACAGTGCCCTTCCTGTGGAGGGCACATTACCCAAGGTGTTCGCTTTAAGAGGTGCACCGTGGGCCAAACACGTCATCGCTATCGGAGCCCTCTCTGGACTGATATCATCTCTGCTTGGAATGCACGTAGCACTTTCTAGAGTGCTTTTCTCCATGGCGAGCGATGGCCTTATCTTCAAATACATCGCGAAGGTAAATCCAAGAACAGAAACCCCCGTGATTGCTGTAGTAGTAGCAGGCACGTTCTCTGCAATACTTGCCCTTTGTTTTAAACTGCACTTTTTGCTAGAGATGACTGCCATGAGCACTTTGATGGCCTACACCACTGTAGCCGTTTGTGTGATGGTGCTTCGATACAGGCCAGAAACTGTGGGTTTCGTAAACCAAGATGACCACTCAGAAGAAGGCACCGTTGGGCAAACGAATCACAACACACCGGTAGAAGATTCCCCGCTATTAGGAGTTCGTCAGGCCCCACAACCCTCAGAAAAAACAACTTCCTTAGCAATAGTTGCTATAGTTGTTTCCAGCTTAAGTTTCGTAGCGCTGGGAGTTTTATTAGTCTGGGGATCTCATCATCTCGCTATGGCAAAGTGGTGGGCCATTTTAATTTTGATCCTGGGAAGCTTACTGATAGTTTGTTGCGCGCTGCTTCTCCTCTGGTTGCCACAGAACAAGTCACCTCTTCGATTTACGGTCCCTTTTGTTCCGGTTCTTCCGCTTTTCACGGTGTTCATCAACCTCTTCTTGATTCTGAACCTACCGTACATGACGTGGATACGGTTTTCTGTTTGGATGATTACAGGTGAGTCCAAAGCCTGTTCACTCATACGCAGGTAA

Transcript

aawi_s0030.g121.t1

CATAAACATTCTCGTGATTCTGTTCGTGGTAAGCGTTGGCGCTTGCTACGCTGAGCTAAAGAACTGAACTGACAATTTCATGCCGTATGGATTCTCTGGGGTGATGATCGGAGCTGCAATCTGCTTTTATGCTTTCGTTGGCTTTGATGTAATTGCAACCACTGGAGAGGAAGCAAGAAATCCTTGCAGAGGAATACCTATTTCAATTGTCTTGACTCTCGGACTCGCTCGCAAAAAGATCATCGAGGCAGATACTCTGACTTCAACCCAACTGAAACGCCGTGTGTCCACATTTGACTTGACCGCCCTCGGCGTTGGCAGCACAATCGGGGTTGGGCTCTGCATAAACATTCTCGTGATTCTGTTCGTGGTAAGCGTTGGCGCTTGCTACGCTGAGCTAAAGAACTGGACTGACAATTTCATGCCGTATGGATTCTCTGGGGTGATGATCGGAGCTGCAACCTGCTTTTATGCTTTCGTTGGCTTTGATGTAATTGCAACCACTGGAGAGGAAGCAAGAAACCCTTGCAGAGGAATACCTACTTCAAATGTCTTGACTCTCGGTAAATCCCTCGCAAAAGTTAATCCCAGAACAGAAATCCCAACCATTGCTACAGTGGTATGTGGTGTTCCCTCCGCACTTTTTGCCTTTATTTTCAACCTGCACGACTTGGTGGAGATGATGTCAATTGGAACCTTGCTGGTTTGCACGACTGTGGTCGTTTGTGTGATGGTGCTAAGGTACAGACCAGAAACGCCGGCCTTTGTCAGACAAAACGACCTAGAAGAGGGCGCGGAAGGCCAAACAGAAAGCAAAAAACTGGAAACGAAAGAAGATTCCCCTCTGTTGGGGATCCTTCCAACACAACAACCTTCACGTAAAATAGCCTCTGGCTCGCTGGTGGTCATTATAATGAGCAGCTTTGGTATGGTGGCACTCAGCGCGTTGATTACATGGGGATCTGATTACCTCTCTCTGGTAAAATGGTGGGCTGTTTTGCTGTTGGCTGTAATAATCTTTTATCTTATTAGTTGCACCTTGCTTCTTCTCTGGCTGCCACAGAACAAGACTCCTCTTCCCTTTATGGTCCCATTTGTTCCTGTGCTTCCACTTGTTTCAGTGTTTATCAACGTATTCCTAATGCTGAAGCTGTCTTACTTAACGTGGCTACGTTTTGCTGTCTGGATGGTAATCGGTCGTTCTTTGTCCCTGCTTGATTTGATTTCTCTCGGAGTTGGCACCACCATTGGCTCGGGAATATACGTATTAGCAGGCGATGTCGTTCGTGAGGATACAGGTCCGAGTATTGTTATTTCGTTCTTGATCGCCGGCATAGCATCCATTCTTTCGGCTCTTTGCTATGCTGAATTCGGTGCCCGCGTGCCAAAAGCGGGCTCTGCCTATGTCTATAGCTATGTGACAATAGGAGAACTCTGCGCGTATGTAGTAGGTTGGAACTTGATTCTAGATTACGTCACACAAATTTCTTGCTATGCCCGTGCAACAAGTTCTTACATCGATTCTCTCTTTGGCGACAGAATTGAAAACTTTACCATCTCAACTATTGGTAAAATACGCACTGGTGATATCGTCGTATATCCTGACCTGTTGGCAGTGCTAATTATTTTCATAATAACCATTGTCCAGATCGCCGGAATGAGGAAAACTTCCTGGTGTATGAAACTCACAGCTGGAGTTACGTTATTCGTGGCTTTTTTCGTGGTGGGCGTTGGCGCTTGTTATACGAAGTCCAACAACTGGACAGACAATTTCATGCCGTATGGATTCTCTGGGGTGATGAGGGGAGCTGCAACTTGCTTCTATGCGTACAATGGCTTCGAGGTAATTGCAACCACCGGAGAGGAAGCTCTAAACCCTTCCAGAGCAATACCCATTGCAATAATTTCGACTGTTGGCATTTGTTCCTTGGCGTATTTTGGTGTTTCAGGAGTACTAAGTCTGATGTGTCCCTACAGTGCCCTTCCTGTGGAGGGCACATTACCCAAGGTGTTCGCTTTAAGAGGTGCACCGTGGGCCAAACACGTCATCGCTATCGGAGCCCTCTCTGGACTGATATCATCTCTGCTTGGAATGCACGTAGCACTTTCTAGAGTGCTTTTCTCCATGGCGAGCGATGGCCTTATCTTCAAATACATCGCGAAGGTAAATCCAAGAACAGAAACCCCCGTGATTGCTGTAGTAGTAGCAGGCACGTTCTCTGCAATACTTGCCCTTTGTTTTAAACTGCACTTTTTGCTAGAGATGACTGCCATGAGCACTTTGATGGCCTACACCACTGTAGCCGTTTGTGTGATGGTGCTTCGATACAGGCCAGAAACTGTGGGTTTCGTAAACCAAGATGACCACTCAGAAGAAGGCACCGTTGGGCAAACGAATCACAACACACCGGTAGAAGATTCCCCGCTATTAGGAGTTCGTCAGGCCCCACAACCCTCAGAAAAAACAACTTCCTTAGCAATAGTTGCTATAGTTGTTTCCAGCTTAAGTTTCGTAGCGCTGGGAGTTTTATTAGTCTGGGGATCTCATCATCTCGCTATGGCAAAGTGGTGGGCCATTTTAATTTTGATCCTGGGAAGCTTACTGATAGTTTGTTGCGCGCTGCTTCTCCTCTGGTTGCCACAGAACAAGTCACCTCTTCGATTTACGGTCCCTTTTGTTCCGGTTCTTCCGCTTTTCACGGTGTTCATCAACCTCTTCTTGATTCTGAACCTACCGTACATGACGTGGATACGGTTTTCTGTTTGGATGATTACAGGTGAGTCCAAAGCCTGTTCACTCATACGCAGGTAAACAGCCTCAGTTTCGCTGACCATGCAGTAGTAACCCGAGTTGAAGAAATGGCGCCAATTATTGGGGCACTTGTTCACCTCTAGGCATTTTGGTTGCCACGCTGCAAAGCGTGAAATTCCAAAATTTGAGGTTCTCATGACAACGAGAACAAACATCAGTGAATCGTTTATTTTCTCTATTTGCTTAACTAGAGGATTATAAAATAATTTGCCTACAAATTTCAAACTTAACGAAAGAAATTGCTTCGGCTTTGCTGAGAAAACCTTGTCCTTTTCAGGTTTGTCCATCTATTTAACTTATGGCCTAGTGAACAGTGTAGAAGGCAAAAGACAAAGCCGTGAGATTGCTGATGAAGACATGATCACCAACGAAGCTATCTTGGCGATTCTACAAGAATGATGCGATATGCGAAACCGATCAAAACTTCTTAAGCTCGAAAACCGAACCTTTGGGTACCTGCTATTGGTCAGAACTGACCAATCGGACAGCCCATCCGAAAACGTAGCGCGCCAGTACTGAGAACTGAAAGGTGCTCGGGAATGAGGGCCGTTTGATAATTTGCATGTTCCATCATTTGCAAGTGCAAAGCATTTCTGAATTATGTAACTCAGTGTCCTTAGTGTATAAGCAACATCTCGCAGTGATATTGAAAAAAAAAAAGAGACACAAAGATCAGCAACTTGAAAAAAAGGACTCTAAAAAAGAGAAGAGCTTGGGCGACAAGCAACATCAGATAAAACATAAGACGATCTTAAGAAAAATCACAACCTGGAGCAATTGAGGTGGCATTTCGCCACCTCAAATTCTGGAAAACTTAGAGACTTGCACTGGCCCTGGTGGTAACCTCTCCCCATTGTGAGCCTATATCAAGAAAATCAAGCTCATGTTGTTATTTTCTAATGTCACAGTTAAATGGATTTTACACGGTAAACTACTACGAGACACACCGAAGTCATCTTCAATTTCCTCAGAATTTGTGGTACCGCGTTCAATATCATCTTCAAGATATTTCCAGCGTAAACACACGTTTATTTAGTGAAAGAAAATAAAAACATGTATCTCTTGTATATTTTCTTGAGATCCGAGTTCCATTCCTGAAATAAATTAACCTCTTGCCTCTGTTTTCTCTTCTCCTTCAGCTTGGGTGGCTGGATCCAAACCCTCAATCCTTTTCTTGTAAACCCAGTGAAAAACAGCCGCTTCTTTGAGTGGAATATACAAACAATAAAGGAGTTTAATGACA

Protein

Uniprot

Uniprot term	Description
Q09143	High affinity cationic amino acid transporter 1 OS=Mus musculus OX=10090 GN=Slc7a1 PE=1 SV=1
P30823	High affinity cationic amino acid transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc7a1 PE=2 SV=1
P52569	Cationic amino acid transporter 2 OS=Homo sapiens OX=9606 GN=SLC7A2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13906	AA_permease_C	C-terminus of AA_permease	Domain	Interproscan
PF00324	AA_permease	Amino acid permease	Domain	Interproscan
PF13520	AA_permease_2	Amino acid permease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029485	Domain	Cationic amino acid transporter, C-terminal	Interproscan
IPR004841	Domain	Amino acid permease/ SLC12A domain	Interproscan
IPR002293	Family	Amino acid/polyamine transporter I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43243	INNER MEMBRANE TRANSPORTER YGJI-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000064	Molecular Function	L-ornithine transmembrane transporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006865	Biological Process	amino acid transport	Interproscan
GO:0015171	Molecular Function	amino acid transmembrane transporter activity	Interproscan
GO:0015181	Molecular Function	L-arginine transmembrane transporter activity	Interproscan
GO:0015189	Molecular Function	L-lysine transmembrane transporter activity	Interproscan
GO:0097638	Biological Process	L-arginine import across plasma membrane	Interproscan
GO:1903352	Biological Process	L-ornithine transmembrane transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13864	SLC7A2, ATRC2; solute carrier family 7 (cationic amino acid transporter), member 2	-	Transporters	ko02000	deepkoala