Detailed information of aawi_s0046.g109.t1 in Acropora awi

Genomic Location: sc0000046_pilon:1413478...1414436
NR annotation: XP_015755150.1, PREDICTED: peptide deformylase, mitochondrial-like [Acropora digitifera]
Species abbreviation AAWI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
S4R2K0Peptide deformylase, mitochondrial OS=Mus musculus OX=10090 GN=Pdf PE=3 SV=1
Q9HBH1Peptide deformylase, mitochondrial OS=Homo sapiens OX=9606 GN=PDF PE=1 SV=1
B6RGY0Peptide deformylase 1A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PDF1A PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006126 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01327
all species →		Pep_deformylasePolypeptide deformylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023635
all species →		FamilyPeptide deformylaseInterproscan
IPR036821
all species →		Homologous_superfamilyPeptide deformylase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10458
all species →		PEPTIDE DEFORMYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0042586
all species →		Molecular Functionpeptide deformylase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0018206
all species →		Biological Processpeptidyl-methionine modificationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01462PDF, def; peptide deformylaseEC:3.5.1.88
Enzymes with EC numbers-deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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