Detailed information of aawi_s0046.g36.t2 in Acropora awi

Genomic Location: sc0000046_pilon:496048...519094
NR annotation: CAH3041300.1, unnamed protein product [Pocillopora meandrina]
Species Acropora awi · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O16025Allene oxide synthase-lipoxygenase protein OS=Plexaura homomalla OX=47982 PE=1 SV=1
P09917Polyunsaturated fatty acid 5-lipoxygenase OS=Homo sapiens OX=9606 GN=ALOX5 PE=1 SV=2
P48999Polyunsaturated fatty acid 5-lipoxygenase OS=Mus musculus OX=10090 GN=Alox5 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000519 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01477
all species →		PLATPLAT/LH2 domainDomainInterproscan
PF00305
all species →		LipoxygenaseLipoxygenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001024
all species →		DomainPLAT/LH2 domainInterproscan
IPR013819
all species →		DomainLipoxygenase, C-terminalInterproscan
IPR020834
all species →		Conserved_siteLipoxygenase, conserved siteInterproscan
IPR001885
all species →		FamilyLipoxygenase, mammalianInterproscan
IPR036226
all species →		Homologous_superfamilyLipoxigenase, C-terminal domain superfamilyInterproscan
IPR000907
all species →		FamilyLipoxygenaseInterproscan
IPR036392
all species →		Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11771
all species →		LIPOXYGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0016702
all species →		Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0005506
all species →		Molecular Functioniron ion bindingInterproscan
GO:0034440
all species →		Biological Processlipid oxidationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for aawi_s0046.g36.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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