Detailed information of aawi_s0047.g52.t2 in Acropora awi

Genomic Location: sc0000047_pilon:775455...794297
NR annotation: XP_044164155.1, dynein axonemal intermediate chain 4-like [Acropora millepora]
Species Acropora awi · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6GPB9Dynein axonemal intermediate chain 4 OS=Xenopus laevis OX=8355 GN=dnai4 PE=2 SV=1
E9PYY5Dynein axonemal intermediate chain 4 OS=Mus musculus OX=10090 GN=Dnai4 PE=1 SV=1
Q5VTH9Dynein axonemal intermediate chain 4 OS=Homo sapiens OX=9606 GN=DNAI4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004309 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775
all species →		Conserved_siteWD40 repeat, conserved siteInterproscan
IPR050687
all species →		FamilyDynein Intermediate ChainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12442
all species →		DYNEIN INTERMEDIATE CHAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003341
all species →		Biological Processcilium movementInterproscan
GO:0005858
all species →		Cellular Componentaxonemal dynein complexInterproscan
GO:0007018
all species →		Biological Processmicrotubule-based movementInterproscan
GO:0045503
all species →		Molecular Functiondynein light chain bindingInterproscan
GO:0045504
all species →		Molecular Functiondynein heavy chain bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24723DNAI4, WDR78; dynein axonemal intermediate chain 4-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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