Gene detail

Detailed information of aawi_s0048.g98.t2 in Acropora awi

Genomic Location: sc0000048_pilon:1206730...1219475
NR annotation: XP_029210184.2, uncharacterized protein LOC114973994 isoform X1 [Acropora millepora]
Species Acropora awi · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

aawi_s0048.g98.t2

ATGAGTCCTGTTAGTCAAGAGACTGACGAGTCTCTAAGCAACTCGATATTGCTTAGCAGTCATTCCTCGTGTTCATCAATACAAAACTCGCAAGAATTATTAGCAACGGAAGAAAGCTGCTCTGTTGAAAGCATGGATGTCTTTGAAGACGAACATTTCTCGGTATCTGACACAGAAGCAGACTCTTCGATTATGCTCCTAAAAAGTCTAAATAGTGAATCACCTTCGTCTTCGAGTGTCTCCCGTCGCAATGATAATTCTACGATTATTAGACTTCATGAAGAGTTGCTTAAATCGAAGAGAAATAACTGGGAAGTTGTGGACGCCTTAGGGGAAGCTCACGAAGTTATCAGGAATCTTCGTTTGCGAGAGCAACGACTGAATGTGATTTTAACGGGCTGTGCGGGGAAAAACGCTACCACAAACGGTTTTGTCGAACGTCTGAATTTGTCAGAAAGCAAAATAATTGAACTGCAATTAACTTTAAGAAAAGAGGAAGCGATGAAAACGAGAGAAGACTTGAGAGCAATGATGGAAGAGCGAGATAGACTAAAACAAATGCTTGGGAGGACTGAAAACAATCGACGGTTGGTGTTGCTTGCAAAAGGTGAAAGAGAAAGAGAACTAGAGTTTTCTCAGATTTGTGTAAAAGATCTAGCAGCAGATATCGAAGATAAAGACACAAAAATATCTTCTGTCGAATTCAAATTGGCTTCGTTGGAAGATCAGCTGAAGGACAAGGACAGCGAAATTGAGAAAATACGCAACGAGAGGAATATTTTGAGAGAGGCAGCGATTCGGAGCGAGAAAGAAATAGAAATTCTCTCAGAGAAACTACACAATCTTCTGCATTGCAAGGAGCAGCATAAAAGTAGTTCAGTCCAAACCGATGCAAGTCTGTTACATGAAATCCAAACCTGCGCTTCCGTTGAGAAAACTGTGAATAGCGAACAATCCATTGAGGCGGCCAAGCAAACAACACTTGAAAAGGATTTGCGATCCCTCGAATCGCGACATAATCAAGACATGGAAATTATTCACGATTTGAAGTTCAAACTGGAGGAGTGGGGGAGCATCGTGAAATCCATGAACGACCTCATTCAAAATACCAACCAACAGCAACAACTGGCTAGGAAGGAAATTGCTGATTTGCAGTTTCTTGAGGTCTCAGAAAATTGCAGCATCACACAAAATGAACAAGACGAGGATTTCGAGCAACTTGACGCGTCGCGCATTCAGAAAGAACAAACGCTGACTATGAGCGATGATTCAGTTAGCGTGGACTGTTGTGCTTCAAGTCAAATGATTGAAACAAAACAACCTGCAATCACGCAGTTAGAGCTTAACCTTGGACGATTATCTGATTTAGACAAAACCTGTGAGGATTGTGATCCTCAGTTTGAGGCAACGGAAGGCCAAGACGTTCTCGATTTGAAGGGCTGTTTTAAGTCTTTTACAGCACACCTTATTCAACCAGACAACGTACGGATGGCAAGAATAACAACTATAGACAGCTTTGTGAGTCCACTTGTTACTGAGGATTCCAACATTCCTCAACGTCCACCAAGAAAGAAACGAATTGCGAAAGGAAGTAAACTGCCTGAAGTGACCAATAGACGGTTGAGTATAGACAGTGCATTGAGTTCGAACAGCGCCATAACTCCTTCAGATGATTCCTCATCAATTGCTTCATTTAAGTTACAATCGTCTCATGACTCAGTAGGGGCTCGTAGGGGGTCACATAGTGGATCAAATAAACGGAGACTTCCCTCAGTTCCCAGTGGAGAAGCTATCATCGAAGGCGCTGATGGGGCAAGAGAGCCGCCTAGAGTGGTGTCTATATACAAGCCACCGAGTAGTGTGAGTGATCGCCAGAAACGTTTTGGCAGCAGCGACGTTTTAACGGGTGCTCCGGTCTCTCCTAGAAGCAGCCGCAGATTTAGCTTAAGCAATATCAAAAGGAGATTTAGTAAGGGAAATAAAGGCTCAGagcTTAAACTCCCAATTAATCGAAAAGACGCGTTCTCTCTCACCTGTTTACCCGTGCCTAGTAACAAGGATATCAGACCAGGTTCAAAAGATGACACTCCACAAGAAGCTAAAAAGAGGCTCTTTAGCGGGAAATTCGCAATCATCAGAAAAAGAAGACGCAAAAATTCGATTGAAACAGTGAGCAGTGCCTCGGGTAGCTTTAGAACAGTAACTCCCCTTAATAGCGAATGCGACGCCACGAATGGAATGAGTGGATCAAAGACTGTATCTTTATCTCTTAACGGCATAGAATTGGTACAACCACCACCAGTAAGGACATCGACTCCAAAATGTCAAGGTCGTGTCTCTTCCCAGAAAAGATACAACAATGAACAATGGAAAAAGTGCTTATTGCTGATATTTCAGCACCTAAATCCCATCGAACTGTGCGGCCTCGAACGAGTGTGCCGTGTATGGCGCCAAATGAGTGAACATCCTATCCTCTGGAAGGAAGTGATTCTCGAAGATATACCACTTAACAATATGATTCTCCATTCTATCTCTAGGAAATGCAGTGGCACGAGTTTATTGAAGCTTAAAGGGCTGCAAAATATCAAATCAAGAGAAAAATACAGTTTTTTAGATTCAGGGGATATGAGATGTTATTTAGAAAGAGCGACAGGTCTATGTTTCACCCTGGCCAGCTGTCACTGTCGCGAGTTACAAGAAATGATTTACATCAGTGATTCATTTCCCGTCTGCCCTGAAGCATTATGGGCCTTGTGGGGTTGTCGCAAAATTAGAACCCTGCGCGTACCGCCCCTGTGTCCATGTTCACACCCCGAGCGTTTCAATGACAAGAGCCTGGAAATGATATCAAACTGCTGGCCAAACTTGCGTCAGCTATCAGTGGGAGGCCCCAGTATCACTTCAACTGGACTCATTTATATCGCCAATGGTTGCCTCAGACTTCAGGAATTGGAGCTGGATCGGGCAATCCTTATCAGCGAAGAAATCGCCCACGCCATGTGCTTGTGTGGACTGCGCGGTTTGGAAACGATCTCGTTTACATTTACGCCGGTCTCTCCAGGCGCAATCAAGGAGCTACTTGGTGCGTGTCCTCGACTGGAGCGCATTGAAGTGCACATTGGGATATCAGATTATTTCACTGATGTGAAAGATGAAGGAAACATCAGGAAATACGAGCAGATTGTCAAAACATTGACGGCTTTACAAGATGAAAACCTGGAATTTGCCAGAGTTCTGTGGATAAATGCAGACTACGGATAA

Transcript

aawi_s0048.g98.t2

TATAGTAGCAAGCGCGTGCAACTTGTCGTCAAAGGTAAACTTGCATTATGACGTTTAATCGAGCGAGCAAAAAAAAGGAAAACCCCACAGACAGAAGTTTTGTGGACAGGAAAGAAGCTTGATGTCACAAACAGTCATGAGTCCTGTTAGTCAAGAGACTGACGAGTCTCTAAGCAACTCGATATTGCTTAGCAGTCATTCCTCGTGTTCATCAATACAAAACTCGCAAGAATTATTAGCAACGGAAGAAAGCTGCTCTGTTGAAAGCATGGATGTCTTTGAAGACGAACATTTCTCGGTATCTGACACAGAAGCAGACTCTTCGATTATGCTCCTAAAAAGTCTAAATAGTGAATCACCTTCGTCTTCGAGTGTCTCCCGTCGCAATGATAATTCTACGATTATTAGACTTCATGAAGAGTTGCTTAAATCGAAGAGAAATAACTGGGAAGTTGTGGACGCCTTAGGGGAAGCTCACGAAGTTATCAGGAATCTTCGTTTGCGAGAGCAACGACTGAATGTGATTTTAACGGGCTGTGCGGGGAAAAACGCTACCACAAACGGTTTTGTCGAACGTCTGAATTTGTCAGAAAGCAAAATAATTGAACTGCAATTAACTTTAAGAAAAGAGGAAGCGATGAAAACGAGAGAAGACTTGAGAGCAATGATGGAAGAGCGAGATAGACTAAAACAAATGCTTGGGAGGACTGAAAACAATCGACGGTTGGTGTTGCTTGCAAAAGGTGAAAGAGAAAGAGAACTAGAGTTTTCTCAGATTTGTGTAAAAGATCTAGCAGCAGATATCGAAGATAAAGACACAAAAATATCTTCTGTCGAATTCAAATTGGCTTCGTTGGAAGATCAGCTGAAGGACAAGGACAGCGAAATTGAGAAAATACGCAACGAGAGGAATATTTTGAGAGAGGCAGCGATTCGGAGCGAGAAAGAAATAGAAATTCTCTCAGAGAAACTACACAATCTTCTGCATTGCAAGGAGCAGCATAAAAGTAGTTCAGTCCAAACCGATGCAAGTCTGTTACATGAAATCCAAACCTGCGCTTCCGTTGAGAAAACTGTGAATAGCGAACAATCCATTGAGGCGGCCAAGCAAACAACACTTGAAAAGGATTTGCGATCCCTCGAATCGCGACATAATCAAGACATGGAAATTATTCACGATTTGAAGTTCAAACTGGAGGAGTGGGGGAGCATCGTGAAATCCATGAACGACCTCATTCAAAATACCAACCAACAGCAACAACTGGCTAGGAAGGAAATTGCTGATTTGCAGTTTCTTGAGGTCTCAGAAAATTGCAGCATCACACAAAATGAACAAGACGAGGATTTCGAGCAACTTGACGCGTCGCGCATTCAGAAAGAACAAACGCTGACTATGAGCGATGATTCAGTTAGCGTGGACTGTTGTGCTTCAAGTCAAATGATTGAAACAAAACAACCTGCAATCACGCAGTTAGAGCTTAACCTTGGACGATTATCTGATTTAGACAAAACCTGTGAGGATTGTGATCCTCAGTTTGAGGCAACGGAAGGCCAAGACGTTCTCGATTTGAAGGGCTGTTTTAAGTCTTTTACAGCACACCTTATTCAACCAGACAACGTACGGATGGCAAGAATAACAACTATAGACAGCTTTGTGAGTCCACTTGTTACTGAGGATTCCAACATTCCTCAACGTCCACCAAGAAAGAAACGAATTGCGAAAGGAAGTAAACTGCCTGAAGTGACCAATAGACGGTTGAGTATAGACAGTGCATTGAGTTCGAACAGCGCCATAACTCCTTCAGATGATTCCTCATCAATTGCTTCATTTAAGTTACAATCGTCTCATGACTCAGTAGGGGCTCGTAGGGGGTCACATAGTGGATCAAATAAACGGAGACTTCCCTCAGTTCCCAGTGGAGAAGCTATCATCGAAGGCGCTGATGGGGCAAGAGAGCCGCCTAGAGTGGTGTCTATATACAAGCCACCGAGTAGTGTGAGTGATCGCCAGAAACGTTTTGGCAGCAGCGACGTTTTAACGGGTGCTCCGGTCTCTCCTAGAAGCAGCCGCAGATTTAGCTTAAGCAATATCAAAAGGAGATTTAGTAAGGGAAATAAAGGCTCAGagcTTAAACTCCCAATTAATCGAAAAGACGCGTTCTCTCTCACCTGTTTACCCGTGCCTAGTAACAAGGATATCAGACCAGGTTCAAAAGATGACACTCCACAAGAAGCTAAAAAGAGGCTCTTTAGCGGGAAATTCGCAATCATCAGAAAAAGAAGACGCAAAAATTCGATTGAAACAGTGAGCAGTGCCTCGGGTAGCTTTAGAACAGTAACTCCCCTTAATAGCGAATGCGACGCCACGAATGGAATGAGTGGATCAAAGACTGTATCTTTATCTCTTAACGGCATAGAATTGGTACAACCACCACCAGTAAGGACATCGACTCCAAAATGTCAAGGTCGTGTCTCTTCCCAGAAAAGATACAACAATGAACAATGGAAAAAGTGCTTATTGCTGATATTTCAGCACCTAAATCCCATCGAACTGTGCGGCCTCGAACGAGTGTGCCGTGTATGGCGCCAAATGAGTGAACATCCTATCCTCTGGAAGGAAGTGATTCTCGAAGATATACCACTTAACAATATGATTCTCCATTCTATCTCTAGGAAATGCAGTGGCACGAGTTTATTGAAGCTTAAAGGGCTGCAAAATATCAAATCAAGAGAAAAATACAGTTTTTTAGATTCAGGGGATATGAGATGTTATTTAGAAAGAGCGACAGGTCTATGTTTCACCCTGGCCAGCTGTCACTGTCGCGAGTTACAAGAAATGATTTACATCAGTGATTCATTTCCCGTCTGCCCTGAAGCATTATGGGCCTTGTGGGGTTGTCGCAAAATTAGAACCCTGCGCGTACCGCCCCTGTGTCCATGTTCACACCCCGAGCGTTTCAATGACAAGAGCCTGGAAATGATATCAAACTGCTGGCCAAACTTGCGTCAGCTATCAGTGGGAGGCCCCAGTATCACTTCAACTGGACTCATTTATATCGCCAATGGTTGCCTCAGACTTCAGGAATTGGAGCTGGATCGGGCAATCCTTATCAGCGAAGAAATCGCCCACGCCATGTGCTTGTGTGGACTGCGCGGTTTGGAAACGATCTCGTTTACATTTACGCCGGTCTCTCCAGGCGCAATCAAGGAGCTACTTGGTGCGTGTCCTCGACTGGAGCGCATTGAAGTGCACATTGGGATATCAGATTATTTCACTGATGTGAAAGATGAAGGAAACATCAGGAAATACGAGCAGATTGTCAAAACATTGACGGCTTTACAAGATGAAAACCTGGAATTTGCCAGAGTTCTGTGGATAAATGCAGACTACGGATAAACCTGCATGCAAGTTTATTTTTACATTTTTACCAGCAAAGAGACAGAAATATTATCGACAGAGCTATTTAAGGAAACGAATGTTCATAAAAGCGATACGTTTGATCGCCTGCATTTTCCAACTTCAATAACACCTTGTTTTGAATCGTTGATTTAGAATCTATTGCATGCTTTGTCACTGAGATGATCCCATTTAAATGAACTAGAATGTCCTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8TF61	F-box only protein 41 OS=Homo sapiens OX=9606 GN=FBXO41 PE=1 SV=5
Q6NS60	F-box only protein 41 OS=Mus musculus OX=10090 GN=Fbxo41 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008678 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12937 all species →	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052283 all species →	Family	Genomic Stability and Neuronal Morphogenesis Regulator	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001810 all species →	Domain	F-box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15739 all species →	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10316	FBXO41; F-box protein 41	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.