Detailed information of aawi_s0051.g65.t1 in Acropora awi

Genomic Location: sc0000051_pilon:1557273...1580619
NR annotation: XP_044176472.1, protocadherin Fat 4-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
P33450Cadherin-related tumor suppressor OS=Drosophila melanogaster OX=7227 GN=ft PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR039808FamilyCadherinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027CADHERIN-23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0007043Biological Processcell-cell junction assemblyInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016339Biological Processcalcium-dependent cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0034332Biological Processadherens junction organizationInterproscan
GO:0044331Biological Processcell-cell adhesion mediated by cadherinInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16669FAT4; protocadherin Fat 4-Cell adhesion moleculesko04515deepkoala

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