Detailed information of aawi_s0054.g108.t2 in Acropora awi

Genomic Location: sc0000054_pilon:1411020...1469363
NR annotation: CAH3140111.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B0VX73Inactive rhomboid protein 1 OS=Callithrix jacchus OX=9483 GN=RHBDF1 PE=3 SV=1
B1MT31Inactive rhomboid protein 1 OS=Plecturocebus moloch OX=9523 GN=RHBDF1 PE=3 SV=1
Q96CC6Inactive rhomboid protein 1 OS=Homo sapiens OX=9606 GN=RHBDF1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR035952Homologous_superfamilyRhomboid-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47822CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP